Gene name: DAL7
Reference locus (S288C): YIR031C
Gene biotype: protein_coding
Description: Malate synthase; can accept butyryl-CoA as acyl-CoA donor in addition to traditional substrate acetyl-CoA; recycles glyoxylate generated during allantoin degradation; SWAT-GFP and mCherry fusion proteins localize to the cytosol; expression sensitive to nitrogen catabolite repression and induced by allophanate, an intermediate in allantoin degradation
Top 10 interactors (score): ICL1 (0.997); ICL2 (0.994); CIT2 (0.983); DAL3 (0.982); ACS1 (0.973); MAE1 (0.972); MDH3 (0.97); CIT1 (0.969); GOR1 (0.969); AGX1 (0.964); CIT3 (0.961); MDH2 (0.961); MDH1 (0.958); DAL2 (0.958); FUM1 (0.955); ACS2 (0.953); LSC1 (0.953); PCK1 (0.953); ACH1 (0.942); ERG10 (0.94)
Homologues (species, bitscore): LOC564844 (Danio rerio, 318.2); ENSXETP00000036832 (Xenopus tropicalis, 330.5); icl-1 (Caenorhabditis elegans, 471.9); MLS (Arabidopsis thaliana, 490.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:411242-412906:- | gene-YIR031C_AKU4011 | rna-NM_001179553.3_AKU4011 | cds-NP_012297.3_AKU4011 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000072.1:14002-15666:+ | gene-YIR031C_BG1 | rna-NM_001179553.3_BG1 | cds-NP_012297.3_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:417436-419100:- | gene-YIR031C_Bruggeman | rna-NM_001179553.3_Bruggeman | cds-NP_012297.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:402361-404025:- | gene-YIR031C_CAT1 | rna-NM_001179553.3_CAT1 | cds-NP_012297.3_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:412194-413858:- | gene-YIR031C_CBS1585 | rna-NM_001179553.3_CBS1585 | cds-NP_012297.3_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005351.1:404163-405827:- | gene-YIR031C_CBS436 | rna-NM_001179553.3_CBS436 | cds-NP_012297.3_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005327.1:110701-112365:- | gene-YIR031C_CBS6412 | rna-NM_001179553.3_CBS6412 | cds-NP_012297.3_CBS6412 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:403295-404959:- | gene-YIR031C_CBS6413 | rna-NM_001179553.3_CBS6413 | cds-NP_012297.3_CBS6413 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:404676-406340:- | gene-YIR031C_CENPK1137D | rna-NM_001179553.3_CENPK1137D | cds-NP_012297.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005479.1:394158-395822:- | gene-YIR031C_EthanolRed | rna-NM_001179553.3_EthanolRed | cds-NP_012297.3_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:413986-415650:- | gene-YIR031C_FaliES1 | rna-NM_001179553.3_FaliES1 | cds-NP_012297.3_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000039.1:18518-20182:+ | gene-YIR031C_JAY291 | rna-NM_001179553.3_JAY291 | cds-NP_012297.3_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:418193-419857:- | gene-YIR031C_MUCL30387 | rna-NM_001179553.3_MUCL30387 | cds-NP_012297.3_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005447.1:412809-414473:- | gene-YIR031C_MUCL30388 | rna-NM_001179553.3_MUCL30388 | cds-NP_012297.3_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:412341-414005:- | gene-YIR031C_MUCL39482 | rna-NM_001179553.3_MUCL39482 | cds-NP_012297.3_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:418653-420317:- | gene-YIR031C_MUCL42920 | rna-NM_001179553.3_MUCL42920 | cds-NP_012297.3_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:413015-414679:- | gene-YIR031C_NCIM3186 | rna-NM_001179553.3_NCIM3186 | cds-NP_012297.3_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005271.1:416105-417769:- | gene-YIR031C_NCYC1407 | rna-NM_001179553.3_NCYC1407 | cds-NP_012297.3_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:406951-408615:- | gene-YIR031C_PE2H3 | rna-NM_001179553.3_PE2H3 | cds-NP_012297.3_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:401657-403321:- | gene-YIR031C_PE2H4 | rna-NM_001179553.3_PE2H4 | cds-NP_012297.3_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:413015-414679:- | gene-YIR031C_S288C | rna-NM_001179553.3_S288C | cds-NP_012297.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000097.1:14168-15832:+ | gene-YIR031C_SA1 | rna-NM_001179553.3_SA1 | cds-NP_012297.3_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:410851-412515:- | gene-YIR031C_ThermosaccDry | rna-NM_001179553.3_ThermosaccDry | cds-NP_012297.3_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:408187-409851:- | gene-YIR031C_VR1 | rna-NM_001179553.3_VR1 | cds-NP_012297.3_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000020.1:20018-21682:- | gene-YIR031C_ZTW1 | rna-NM_001179553.3_ZTW1 | cds-NP_012297.3_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:408543-410207:- | gene-YIR031C_Sparadoxus | rna-NM_001179553.3_Sparadoxus | cds-NP_012297.3_Sparadoxus | 91.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |