Gene name: DAL4
Reference locus (S288C): YIR028W
Gene biotype: protein_coding
Description: Nucleobase:cation symporter-1, ncs1 family; Allantoin permease; expression sensitive to nitrogen catabolite repression and induced by allophanate, an intermediate in allantoin degradation
Top 10 interactors (score): DAL1 (0.978); DAL2 (0.945); DUR3 (0.907); DAL7 (0.889); PUT4 (0.861); DAL3 (0.792); DAL5 (0.787); DCG1 (0.779); PUT2 (0.776); DUR1,2 (0.748); DAL80 (0.718); FCY21 (0.696); DAL82 (0.672); TIP1 (0.658); PUT1 (0.62); TPN1 (0.617); RTS2 (0.616); UGA4 (0.616); UGA1 (0.615); YBL036C (0.591)
Homologues (species, bitscore): NCS1 (Arabidopsis thaliana, 199.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:406695-408602:+ | gene-YIR028W_AKU4011 | rna-NM_001179550.3_AKU4011 | cds-NP_012294.3_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000072.1:18306-20213:- | gene-YIR028W_BG1 | rna-NM_001179550.3_BG1 | cds-NP_012294.3_BG1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:412544-414451:+ | gene-YIR028W_Bruggeman | rna-NM_001179550.3_Bruggeman | cds-NP_012294.3_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:397814-399721:+ | gene-YIR028W_CAT1 | rna-NM_001179550.3_CAT1 | cds-NP_012294.3_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:407647-409554:+ | gene-YIR028W_CBS1585 | rna-NM_001179550.3_CBS1585 | cds-NP_012294.3_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005351.1:399617-401524:+ | gene-YIR028W_CBS436 | rna-NM_001179550.3_CBS436 | cds-NP_012294.3_CBS436 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005327.1:106154-108061:+ | gene-YIR028W_CBS6412 | rna-NM_001179550.3_CBS6412 | cds-NP_012294.3_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:398748-400655:+ | gene-YIR028W_CBS6413 | rna-NM_001179550.3_CBS6413 | cds-NP_012294.3_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:400129-402036:+ | gene-YIR028W_CENPK1137D | rna-NM_001179550.3_CENPK1137D | cds-NP_012294.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005479.1:389611-391518:+ | gene-YIR028W_EthanolRed | rna-NM_001179550.3_EthanolRed | cds-NP_012294.3_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:409439-411346:+ | gene-YIR028W_FaliES1 | rna-NM_001179550.3_FaliES1 | cds-NP_012294.3_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000039.1:22818-24725:- | gene-YIR028W_JAY291 | rna-NM_001179550.3_JAY291 | cds-NP_012294.3_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:413647-415554:+ | gene-YIR028W_MUCL30387 | rna-NM_001179550.3_MUCL30387 | cds-NP_012294.3_MUCL30387 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005447.1:408263-410170:+ | gene-YIR028W_MUCL30388 | rna-NM_001179550.3_MUCL30388 | cds-NP_012294.3_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:407794-409701:+ | gene-YIR028W_MUCL39482 | rna-NM_001179550.3_MUCL39482 | cds-NP_012294.3_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:414107-416014:+ | gene-YIR028W_MUCL42920 | rna-NM_001179550.3_MUCL42920 | cds-NP_012294.3_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:408468-410375:+ | gene-YIR028W_NCIM3186 | rna-NM_001179550.3_NCIM3186 | cds-NP_012294.3_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005271.1:411558-413465:+ | gene-YIR028W_NCYC1407 | rna-NM_001179550.3_NCYC1407 | cds-NP_012294.3_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:402408-404315:+ | gene-YIR028W_PE2H3 | rna-NM_001179550.3_PE2H3 | cds-NP_012294.3_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:397114-399021:+ | gene-YIR028W_PE2H4 | rna-NM_001179550.3_PE2H4 | cds-NP_012294.3_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:408468-410375:+ | gene-YIR028W_S288C | rna-NM_001179550.3_S288C | cds-NP_012294.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000097.1:18472-20379:- | gene-YIR028W_SA1 | rna-NM_001179550.3_SA1 | cds-NP_012294.3_SA1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:406304-408211:+ | gene-YIR028W_ThermosaccDry | rna-NM_001179550.3_ThermosaccDry | cds-NP_012294.3_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:403640-405547:+ | gene-YIR028W_VR1 | rna-NM_001179550.3_VR1 | cds-NP_012294.3_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000020.1:15471-17378:+ | gene-YIR028W_ZTW1 | rna-NM_001179550.3_ZTW1 | cds-NP_012294.3_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:404002-405912:+ | gene-YIR028W_Sparadoxus | rna-NM_001179550.3_Sparadoxus | cds-NP_012294.3_Sparadoxus | 92.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |