Gene name: CYT2
Reference locus (S288C): YKL087C
Gene biotype: protein_coding
Description: Cytochrome c1 heme lyase; involved in maturation of cytochrome c1, which is a subunit of the mitochondrial ubiquinol-cytochrome-c reductase; links heme covalently to apocytochrome c1; human homolog HCCS can complement yeast cyt2 null mutant
Top 10 interactors (score): COX10 (0.975); CYT1 (0.954); TIM23 (0.928); HEM15 (0.901); CYC3 (0.852); CYC1 (0.851); CYC7 (0.84); CYC2 (0.817); BCS1 (0.785); CBP3 (0.736); CBP4 (0.735); PUF3 (0.733); COX20 (0.725); COX17 (0.711); PET123 (0.68); RSM10 (0.647); TIM8 (0.643); MRPL20 (0.613); PET117 (0.604); CBP2 (0.597)
Homologues (species, bitscore): HCCS (Homo sapiens, 128.3); Hccs (Mus musculus, 129.8); hccsa (Danio rerio, 130.2); hccs (Xenopus tropicalis, 134.4); Cchl (Drosophila melanogaster, 120.6); cchl-1 (Caenorhabditis elegans, 131.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:263745-264419:- | gene-YKL087C_AKU4011 | rna-NM_001179653.1_AKU4011 | cds-NP_012836.1_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000030.1:240923-241597:- | gene-YKL087C_BG1 | rna-NM_001179653.1_BG1 | cds-NP_012836.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:281919-282593:- | gene-YKL087C_Bruggeman | rna-NM_001179653.1_Bruggeman | cds-NP_012836.1_Bruggeman | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:276721-277395:- | gene-YKL087C_CAT1 | rna-NM_001179653.1_CAT1 | cds-NP_012836.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:275987-276661:- | gene-YKL087C_CBS1585 | rna-NM_001179653.1_CBS1585 | cds-NP_012836.1_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:274583-275257:- | gene-YKL087C_CBS436 | rna-NM_001179653.1_CBS436 | cds-NP_012836.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:260615-261289:- | gene-YKL087C_CBS6412 | rna-NM_001179653.1_CBS6412 | cds-NP_012836.1_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:276443-277117:- | gene-YKL087C_CBS6413 | rna-NM_001179653.1_CBS6413 | cds-NP_012836.1_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:276826-277507:- | gene-YKL087C_CENPK1137D | rna-NM_001179653.1_CENPK1137D | cds-NP_012836.1_CENPK1137D | 98.9 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:274439-275113:- | gene-YKL087C_EthanolRed | rna-NM_001179653.1_EthanolRed | cds-NP_012836.1_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:275252-275926:- | gene-YKL087C_FaliES1 | rna-NM_001179653.1_FaliES1 | cds-NP_012836.1_FaliES1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000357.1:97585-98259:- | gene-YKL087C_JAY291 | rna-NM_001179653.1_JAY291 | cds-NP_012836.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:283717-284391:- | gene-YKL087C_MUCL30387 | rna-NM_001179653.1_MUCL30387 | cds-NP_012836.1_MUCL30387 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:278113-278787:- | gene-YKL087C_MUCL30388 | rna-NM_001179653.1_MUCL30388 | cds-NP_012836.1_MUCL30388 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:275772-276446:- | gene-YKL087C_MUCL39482 | rna-NM_001179653.1_MUCL39482 | cds-NP_012836.1_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:280409-281083:- | gene-YKL087C_MUCL42920 | rna-NM_001179653.1_MUCL42920 | cds-NP_012836.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:277178-277852:- | gene-YKL087C_NCIM3186 | rna-NM_001179653.1_NCIM3186 | cds-NP_012836.1_NCIM3186 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:275966-276640:- | gene-YKL087C_NCYC1407 | rna-NM_001179653.1_NCYC1407 | cds-NP_012836.1_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:283058-283732:- | gene-YKL087C_PE2H3 | rna-NM_001179653.1_PE2H3 | cds-NP_012836.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:279345-280019:- | gene-YKL087C_PE2H4 | rna-NM_001179653.1_PE2H4 | cds-NP_012836.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:277189-277863:- | gene-YKL087C_S288C | rna-NM_001179653.1_S288C | cds-NP_012836.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000008.1:193319-193993:- | gene-YKL087C_SA1 | rna-NM_001179653.1_SA1 | cds-NP_012836.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:275957-276631:- | gene-YKL087C_ThermosaccDry | rna-NM_001179653.1_ThermosaccDry | cds-NP_012836.1_ThermosaccDry | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:275318-275992:- | gene-YKL087C_VR1 | rna-NM_001179653.1_VR1 | cds-NP_012836.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:274524-275198:- | gene-YKL087C_ZTW1 | rna-NM_001179653.1_ZTW1 | cds-NP_012836.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:291635-292309:- | gene-YKL087C_Sparadoxus | rna-NM_001179653.1_Sparadoxus | cds-NP_012836.1_Sparadoxus | 90.6 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |