Gene name: CYB5
Reference locus (S288C): YNL111C
Gene biotype: protein_coding
Description: Cytochrome b5; involved in the sterol and lipid biosynthesis pathways; acts as an electron donor to support sterol C5-6 desaturation
Top 10 interactors (score): NCP1 (0.973); OLE1 (0.958); ERG5 (0.944); ERG11 (0.928); DBP2 (0.927); CYC1 (0.884); RPC19 (0.883); COB (0.865); SMT3 (0.837); PGA3 (0.815); SCM4 (0.803); MCR1 (0.803); CBR1 (0.8); IRC21 (0.794); MGA2 (0.779); AIM33 (0.762); DAP1 (0.744); CYC7 (0.733); MLS1 (0.705); ALD6 (0.692)
Homologues (species, bitscore): CYB5B (Homo sapiens, 87.4); Cyb5b (Mus musculus, 91.7); cyb5b (Danio rerio, 95.5); cyb5b (Xenopus tropicalis, 89.7); Cyt-b5 (Drosophila melanogaster, 90.5); cytb-5.1 (Caenorhabditis elegans, 81.6); CB5-E (Arabidopsis thaliana, 97.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:410584-410946:- | gene-YNL111C_AKU4011 | rna-NM_001182949.3_AKU4011 | cds-NP_014288.3_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:314592-314954:- | gene-YNL111C_BG1 | rna-NM_001182949.3_BG1 | cds-NP_014288.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:421315-421677:- | gene-YNL111C_Bruggeman | rna-NM_001182949.3_Bruggeman | cds-NP_014288.3_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:464356-464718:- | gene-YNL111C_CAT1 | rna-NM_001182949.3_CAT1 | cds-NP_014288.3_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:411199-411561:- | gene-YNL111C_CBS1585 | rna-NM_001182949.3_CBS1585 | cds-NP_014288.3_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:479624-479986:- | gene-YNL111C_CBS436 | rna-NM_001182949.3_CBS436 | cds-NP_014288.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:406672-407034:- | gene-YNL111C_CBS6412 | rna-NM_001182949.3_CBS6412 | cds-NP_014288.3_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:407675-408037:- | gene-YNL111C_CBS6413 | rna-NM_001182949.3_CBS6413 | cds-NP_014288.3_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:410791-411153:- | gene-YNL111C_CENPK1137D | rna-NM_001182949.3_CENPK1137D | cds-NP_014288.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:407605-407967:- | gene-YNL111C_EthanolRed | rna-NM_001182949.3_EthanolRed | cds-NP_014288.3_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:403501-403863:- | gene-YNL111C_FaliES1 | rna-NM_001182949.3_FaliES1 | cds-NP_014288.3_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000021.1:59879-60241:- | gene-YNL111C_JAY291 | rna-NM_001182949.3_JAY291 | cds-NP_014288.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:417485-417847:- | gene-YNL111C_MUCL30387 | rna-NM_001182949.3_MUCL30387 | cds-NP_014288.3_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:452628-452990:- | gene-YNL111C_MUCL30388 | rna-NM_001182949.3_MUCL30388 | cds-NP_014288.3_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:408592-408954:- | gene-YNL111C_MUCL39482 | rna-NM_001182949.3_MUCL39482 | cds-NP_014288.3_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:412625-412987:- | gene-YNL111C_MUCL42920 | rna-NM_001182949.3_MUCL42920 | cds-NP_014288.3_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:416909-417271:- | gene-YNL111C_NCIM3186 | rna-NM_001182949.3_NCIM3186 | cds-NP_014288.3_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:410729-411091:- | gene-YNL111C_NCYC1407 | rna-NM_001182949.3_NCYC1407 | cds-NP_014288.3_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:409650-410012:- | gene-YNL111C_PE2H3 | rna-NM_001182949.3_PE2H3 | cds-NP_014288.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:409056-409418:- | gene-YNL111C_PE2H4 | rna-NM_001182949.3_PE2H4 | cds-NP_014288.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:416940-417302:- | gene-YNL111C_S288C | rna-NM_001182949.3_S288C | cds-NP_014288.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000024.1:1898-2260:- | gene-YNL111C_SA1 | rna-NM_001182949.3_SA1 | cds-NP_014288.3_SA1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:404373-404735:- | gene-YNL111C_ThermosaccDry | rna-NM_001182949.3_ThermosaccDry | cds-NP_014288.3_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:423068-423430:- | gene-YNL111C_VR1 | rna-NM_001182949.3_VR1 | cds-NP_014288.3_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:314190-314552:- | gene-YNL111C_ZTW1 | rna-NM_001182949.3_ZTW1 | cds-NP_014288.3_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:415259-415621:- | gene-YNL111C_Sparadoxus | rna-NM_001182949.3_Sparadoxus | cds-NP_014288.3_Sparadoxus | 94.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |