Gene name: CYB2
Reference locus (S288C): YML054C
Gene biotype: protein_coding
Description: Cytochrome b2, mitochondrial; Cytochrome b2 (L-lactate cytochrome-c oxidoreductase); component of the mitochondrial intermembrane space, required for lactate utilization; expression is repressed by glucose and anaerobic conditions
Top 10 interactors (score): DLD1 (0.994); AGX1 (0.988); DLD2 (0.983); DLD3 (0.98); CYT1 (0.974); GUT2 (0.971); PDA1 (0.957); COX4 (0.954); TOM22 (0.953); MAE1 (0.952); HSP60 (0.946); ACO1 (0.945); OLI1 (0.941); ATP1 (0.937); COX5A (0.936); IDH1 (0.936); CIT1 (0.934); AAC1 (0.933); TOM70 (0.932); PYC1 (0.932)
Homologues (species, bitscore): HAO1 (Homo sapiens, 258.1); Hao1 (Mus musculus, 255.4); hao2 (Danio rerio, 251.5); hao2 (Xenopus tropicalis, 260.0); DmelCG18003 (Drosophila melanogaster, 242.7); F41E6.5 (Caenorhabditis elegans, 232.6); GOX3 (Arabidopsis thaliana, 277.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:159249-161024:- | gene-YML054C_AKU4011 | rna-NM_001182412.1_AKU4011 | cds-NP_013658.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:315129-316904:+ | gene-YML054C_BG1 | rna-NM_001182412.1_BG1 | cds-NP_013658.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:165372-167147:- | gene-YML054C_Bruggeman | rna-NM_001182412.1_Bruggeman | cds-NP_013658.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:168273-170048:- | gene-YML054C_CAT1 | rna-NM_001182412.1_CAT1 | cds-NP_013658.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:159255-161030:- | gene-YML054C_CBS1585 | rna-NM_001182412.1_CBS1585 | cds-NP_013658.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:165162-166937:- | gene-YML054C_CBS436 | rna-NM_001182412.1_CBS436 | cds-NP_013658.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:273012-274787:- | gene-YML054C_CBS6412 | rna-NM_001182412.1_CBS6412 | cds-NP_013658.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:158312-160087:- | gene-YML054C_CBS6413 | rna-NM_001182412.1_CBS6413 | cds-NP_013658.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:160231-162006:- | gene-YML054C_CENPK1137D | rna-NM_001182412.1_CENPK1137D | cds-NP_013658.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:159547-161322:- | gene-YML054C_EthanolRed | rna-NM_001182412.1_EthanolRed | cds-NP_013658.1_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:160020-161795:- | gene-YML054C_FaliES1 | rna-NM_001182412.1_FaliES1 | cds-NP_013658.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000056.1:2627-4402:- | gene-YML054C_JAY291 | rna-NM_001182412.1_JAY291 | cds-NP_013658.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:163914-165689:- | gene-YML054C_MUCL30387 | rna-NM_001182412.1_MUCL30387 | cds-NP_013658.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:167114-168889:- | gene-YML054C_MUCL30388 | rna-NM_001182412.1_MUCL30388 | cds-NP_013658.1_MUCL30388 | 99.5 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:159285-161060:- | gene-YML054C_MUCL39482 | rna-NM_001182412.1_MUCL39482 | cds-NP_013658.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:165087-166862:- | gene-YML054C_MUCL42920 | rna-NM_001182412.1_MUCL42920 | cds-NP_013658.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:165487-167262:- | gene-YML054C_NCIM3186 | rna-NM_001182412.1_NCIM3186 | cds-NP_013658.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:160090-161865:- | gene-YML054C_NCYC1407 | rna-NM_001182412.1_NCYC1407 | cds-NP_013658.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:165492-167267:- | gene-YML054C_PE2H3 | rna-NM_001182412.1_PE2H3 | cds-NP_013658.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:165356-167131:- | gene-YML054C_PE2H4 | rna-NM_001182412.1_PE2H4 | cds-NP_013658.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:165533-167308:- | gene-YML054C_S288C | rna-NM_001182412.1_S288C | cds-NP_013658.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000041.1:16814-18589:+ | gene-YML054C_SA1 | rna-NM_001182412.1_SA1 | cds-NP_013658.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:159345-161120:- | gene-YML054C_ThermosaccDry | rna-NM_001182412.1_ThermosaccDry | cds-NP_013658.1_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:163635-165410:- | gene-YML054C_VR1 | rna-NM_001182412.1_VR1 | cds-NP_013658.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:138871-140646:- | gene-YML054C_ZTW1 | rna-NM_001182412.1_ZTW1 | cds-NP_013658.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:170464-172239:- | gene-YML054C_Sparadoxus | rna-NM_001182412.1_Sparadoxus | cds-NP_013658.1_Sparadoxus | 92.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |