CWP1 (YKL096W)


Gene profile

Gene name: CWP1
Reference locus (S288C): YKL096W
Gene biotype: protein_coding

Description: Cell wall mannoprotein that localizes to birth scars of daughter cells; linked to a beta-1,3- and beta-1,6-glucan heteropolymer through a phosphodiester bond; required for propionic acid resistance; Belongs to the SRP1/TIP1 family

Top 10 interactors (score): SED1 (0.807); CCW14 (0.749); PIR3 (0.749); CRH1 (0.748); SAG1 (0.747); DFG5 (0.746); FIG2 (0.714); DCW1 (0.714); BGL2 (0.712); PIR1 (0.71); PRM5 (0.696); FLO1 (0.693); UTR2 (0.692); RLM1 (0.692); AGA1 (0.69); DAN1 (0.69); NCW2 (0.679); TIR3 (0.635); PST1 (0.597); PAU24 (0.591)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005305.1:247691-248409:+ gene-YKL096W_AKU4011 rna-NM_001179662.1_AKU4011 cds-NP_012827.1_AKU4011 99.4 99.8 Unannotated 1 1 0 False False False True False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000030.1:224810-225529:+ gene-YKL096W_BG1 rna-NM_001179662.1_BG1 cds-NP_012827.1_BG1 99.4 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005513.1:265863-266582:+ gene-YKL096W_Bruggeman rna-NM_001179662.1_Bruggeman cds-NP_012827.1_Bruggeman 99.4 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005529.1:260656-261375:+ gene-YKL096W_CAT1 rna-NM_001179662.1_CAT1 cds-NP_012827.1_CAT1 99.4 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005369.1:259933-260651:+ gene-YKL096W_CBS1585 rna-NM_001179662.1_CBS1585 cds-NP_012827.1_CBS1585 99.4 99.8 Unannotated 1 1 0 False False False True False
CBS436 GCA_001738355.1 Sake Asia CM005353.1:258519-259238:+ gene-YKL096W_CBS436 rna-NM_001179662.1_CBS436 cds-NP_012827.1_CBS436 99.4 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005337.1:244561-245279:+ gene-YKL096W_CBS6412 rna-NM_001179662.1_CBS6412 cds-NP_012827.1_CBS6412 99.7 99.8 Unannotated 1 1 0 False False False True False
CBS6413 GCA_001738265.1 Sake Asia CM005321.1:260389-261107:+ gene-YKL096W_CBS6413 rna-NM_001179662.1_CBS6413 cds-NP_012827.1_CBS6413 99.7 99.8 Unannotated 1 1 0 False False False True False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001532.1:260773-261492:+ gene-YKL096W_CENPK1137D rna-NM_001179662.1_CENPK1137D cds-NP_012827.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005481.1:258383-259102:+ gene-YKL096W_EthanolRed rna-NM_001179662.1_EthanolRed cds-NP_012827.1_EthanolRed 99.8 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005545.1:259196-259915:+ gene-YKL096W_FaliES1 rna-NM_001179662.1_FaliES1 cds-NP_012827.1_FaliES1 99.8 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000357.1:81520-82239:+ gene-YKL096W_JAY291 rna-NM_001179662.1_JAY291 cds-NP_012827.1_JAY291 98.8 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005417.1:267658-268377:+ gene-YKL096W_MUCL30387 rna-NM_001179662.1_MUCL30387 cds-NP_012827.1_MUCL30387 99.4 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005449.1:262054-262773:+ gene-YKL096W_MUCL30388 rna-NM_001179662.1_MUCL30388 cds-NP_012827.1_MUCL30388 99.4 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005289.1:259718-260436:+ gene-YKL096W_MUCL39482 rna-NM_001179662.1_MUCL39482 cds-NP_012827.1_MUCL39482 99.4 99.8 Unannotated 1 1 0 False False False True False
MUCL42920 GCA_001738485.1 Bread Europe CM005433.1:264351-265070:+ gene-YKL096W_MUCL42920 rna-NM_001179662.1_MUCL42920 cds-NP_012827.1_MUCL42920 99.7 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011820.1:261121-261840:+ gene-YKL096W_NCIM3186 rna-NM_001179662.1_NCIM3186 cds-NP_012827.1_NCIM3186 99.3 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005273.1:259911-260630:+ gene-YKL096W_NCYC1407 rna-NM_001179662.1_NCYC1407 cds-NP_012827.1_NCYC1407 99.8 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994150.1:266995-267714:+ gene-YKL096W_PE2H3 rna-NM_001179662.1_PE2H3 cds-NP_012827.1_PE2H3 98.8 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999882.1:263282-264001:+ gene-YKL096W_PE2H4 rna-NM_001179662.1_PE2H4 cds-NP_012827.1_PE2H4 99.4 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001143.9:261132-261851:+ gene-YKL096W_S288C rna-NM_001179662.1_S288C cds-NP_012827.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000008.1:177246-177965:+ gene-YKL096W_SA1 rna-NM_001179662.1_SA1 cds-NP_012827.1_SA1 99.5 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005497.1:259901-260620:+ gene-YKL096W_ThermosaccDry rna-NM_001179662.1_ThermosaccDry cds-NP_012827.1_ThermosaccDry 99.8 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005465.1:259256-259975:+ gene-YKL096W_VR1 rna-NM_001179662.1_VR1 cds-NP_012827.1_VR1 99.4 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000022.1:258462-259181:+ gene-YKL096W_ZTW1 rna-NM_001179662.1_ZTW1 cds-NP_012827.1_ZTW1 99.8 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047497.1:275480-276172:+ gene-YKL096W_Sparadoxus rna-NM_001179662.1_Sparadoxus cds-NP_012827.1_Sparadoxus 83.1 95.4 Verified 1 1 1 False True False False False

Additional files