Gene name: CWC27
Reference locus (S288C): YPL064C
Gene biotype: protein_coding
Description: Peptidyl-prolyl isomerase CWC27; Component of a complex containing Cef1p; putatively involved in pre-mRNA splicing; has similarity to S. pombe Cwf27p; protein abundance increases in response to DNA replication stress
Top 10 interactors (score): CEF1 (0.999); PRP45 (0.997); PRP19 (0.996); BUD31 (0.995); PRP2 (0.988); CWC22 (0.988); RSE1 (0.987); BUD13 (0.986); CWC24 (0.985); IST3 (0.985); BRR2 (0.983); CWC21 (0.981); HSH155 (0.98); SMD2 (0.978); CWC15 (0.978); PRP46 (0.977); PRP8 (0.977); PML1 (0.976); SMX2 (0.975); CUS1 (0.975)
Homologues (species, bitscore): CWC27 (Homo sapiens, 76.3); Cwc27 (Mus musculus, 79.0); cwc27 (Danio rerio, 79.7); cwc27 (Xenopus tropicalis, 80.1); CG10907 (Drosophila melanogaster, 83.2); cyn-16 (Caenorhabditis elegans, 67.8); AT4G33060 (Arabidopsis thaliana, 71.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:406432-407337:- | gene-YPL064C_AKU4011 | rna-NM_001183878.1_AKU4011 | cds-NP_015261.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:612110-613015:- | gene-YPL064C_BG1 | rna-NM_001183878.1_BG1 | cds-NP_015261.1_BG1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:482760-483665:- | gene-YPL064C_Bruggeman | rna-NM_001183878.1_Bruggeman | cds-NP_015261.1_Bruggeman | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:523120-524025:- | gene-YPL064C_CAT1 | rna-NM_001183878.1_CAT1 | cds-NP_015261.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:410505-411410:- | gene-YPL064C_CBS1585 | rna-NM_001183878.1_CBS1585 | cds-NP_015261.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:425063-425968:- | gene-YPL064C_CBS436 | rna-NM_001183878.1_CBS436 | cds-NP_015261.1_CBS436 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:414694-415599:- | gene-YPL064C_CBS6412 | rna-NM_001183878.1_CBS6412 | cds-NP_015261.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:407057-407962:- | gene-YPL064C_CBS6413 | rna-NM_001183878.1_CBS6413 | cds-NP_015261.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:428675-429580:- | gene-YPL064C_CENPK1137D | rna-NM_001183878.1_CENPK1137D | cds-NP_015261.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:404796-405701:- | gene-YPL064C_EthanolRed | rna-NM_001183878.1_EthanolRed | cds-NP_015261.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:412626-413531:- | gene-YPL064C_FaliES1 | rna-NM_001183878.1_FaliES1 | cds-NP_015261.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000283.1:21232-22137:- | gene-YPL064C_JAY291 | rna-NM_001183878.1_JAY291 | cds-NP_015261.1_JAY291 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:423590-424495:- | gene-YPL064C_MUCL30387 | rna-NM_001183878.1_MUCL30387 | cds-NP_015261.1_MUCL30387 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:422676-423581:- | gene-YPL064C_MUCL30388 | rna-NM_001183878.1_MUCL30388 | cds-NP_015261.1_MUCL30388 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:403834-404739:- | gene-YPL064C_MUCL39482 | rna-NM_001183878.1_MUCL39482 | cds-NP_015261.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:461698-462603:- | gene-YPL064C_MUCL42920 | rna-NM_001183878.1_MUCL42920 | cds-NP_015261.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:428694-429599:- | gene-YPL064C_NCIM3186 | rna-NM_001183878.1_NCIM3186 | cds-NP_015261.1_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:411117-412022:- | gene-YPL064C_NCYC1407 | rna-NM_001183878.1_NCYC1407 | cds-NP_015261.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:417724-418629:- | gene-YPL064C_PE2H3 | rna-NM_001183878.1_PE2H3 | cds-NP_015261.1_PE2H3 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:417345-418250:- | gene-YPL064C_PE2H4 | rna-NM_001183878.1_PE2H4 | cds-NP_015261.1_PE2H4 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:428711-429616:- | gene-YPL064C_S288C | rna-NM_001183878.1_S288C | cds-NP_015261.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000057.1:50820-51725:- | gene-YPL064C_SA1 | rna-NM_001183878.1_SA1 | cds-NP_015261.1_SA1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:412426-413331:- | gene-YPL064C_ThermosaccDry | rna-NM_001183878.1_ThermosaccDry | cds-NP_015261.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:427436-428341:- | gene-YPL064C_VR1 | rna-NM_001183878.1_VR1 | cds-NP_015261.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:411736-412641:- | gene-YPL064C_ZTW1 | rna-NM_001183878.1_ZTW1 | cds-NP_015261.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:413463-414380:- | gene-YPL064C_Sparadoxus | rna-NM_001183878.1_Sparadoxus | cds-NP_015261.1_Sparadoxus | 86.1 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |