Gene name: CWC15
Reference locus (S288C): YDR163W
Gene biotype: protein_coding
Description: Pre-mRNA-splicing factor CWC15; Non-essential protein involved in pre-mRNA splicing; component of a complex containing Cef1p; has similarity to S. pombe Cwf15p; Belongs to the CWC15 family
Top 10 interactors (score): PRP45 (0.999); CDC40 (0.999); CEF1 (0.999); PRP22 (0.999); BUD31 (0.999); SMB1 (0.999); PRP19 (0.999); LEA1 (0.999); SNU114 (0.999); CWC2 (0.999); PRP8 (0.998); SMD2 (0.997); YJU2 (0.997); SMD3 (0.997); SMX3 (0.997); SMX2 (0.997); BRR2 (0.997); SMD1 (0.996); PRP16 (0.996); CWC25 (0.996)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:752718-753245:+ | gene-YDR163W_AKU4011 | rna-NM_001180470.3_AKU4011 | cds-NP_010447.3_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:373509-374036:- | gene-YDR163W_BG1 | rna-NM_001180470.3_BG1 | cds-NP_010447.3_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:784216-784743:+ | gene-YDR163W_Bruggeman | rna-NM_001180470.3_Bruggeman | cds-NP_010447.3_Bruggeman | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:771492-772019:+ | gene-YDR163W_CAT1 | rna-NM_001180470.3_CAT1 | cds-NP_010447.3_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:743086-743613:+ | gene-YDR163W_CBS1585 | rna-NM_001180470.3_CBS1585 | cds-NP_010447.3_CBS1585 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:769279-769806:+ | gene-YDR163W_CBS436 | rna-NM_001180470.3_CBS436 | cds-NP_010447.3_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:738535-739062:+ | gene-YDR163W_CBS6412 | rna-NM_001180470.3_CBS6412 | cds-NP_010447.3_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:766984-767511:+ | gene-YDR163W_CBS6413 | rna-NM_001180470.3_CBS6413 | cds-NP_010447.3_CBS6413 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:782085-782612:+ | gene-YDR163W_CENPK1137D | rna-NM_001180470.3_CENPK1137D | cds-NP_010447.3_CENPK1137D | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:752545-753072:+ | gene-YDR163W_EthanolRed | rna-NM_001180470.3_EthanolRed | cds-NP_010447.3_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:760757-761284:+ | gene-YDR163W_FaliES1 | rna-NM_001180470.3_FaliES1 | cds-NP_010447.3_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000119.1:20978-21505:- | gene-YDR163W_JAY291 | rna-NM_001180470.3_JAY291 | cds-NP_010447.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:769594-770121:+ | gene-YDR163W_MUCL30387 | rna-NM_001180470.3_MUCL30387 | cds-NP_010447.3_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:758104-758631:+ | gene-YDR163W_MUCL30388 | rna-NM_001180470.3_MUCL30388 | cds-NP_010447.3_MUCL30388 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:744513-745040:+ | gene-YDR163W_MUCL39482 | rna-NM_001180470.3_MUCL39482 | cds-NP_010447.3_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:682338-682865:+ | gene-YDR163W_MUCL42920 | rna-NM_001180470.3_MUCL42920 | cds-NP_010447.3_MUCL42920 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:781346-781873:+ | gene-YDR163W_NCIM3186 | rna-NM_001180470.3_NCIM3186 | cds-NP_010447.3_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:743917-744444:+ | gene-YDR163W_NCYC1407 | rna-NM_001180470.3_NCYC1407 | cds-NP_010447.3_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:763111-763638:+ | gene-YDR163W_PE2H3 | rna-NM_001180470.3_PE2H3 | cds-NP_010447.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:762416-762943:+ | gene-YDR163W_PE2H4 | rna-NM_001180470.3_PE2H4 | cds-NP_010447.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:781423-781950:+ | gene-YDR163W_S288C | rna-NM_001180470.3_S288C | cds-NP_010447.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000009.1:128622-129149:+ | gene-YDR163W_SA1 | rna-NM_001180470.3_SA1 | cds-NP_010447.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:758892-759419:+ | gene-YDR163W_ThermosaccDry | rna-NM_001180470.3_ThermosaccDry | cds-NP_010447.3_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:773880-774407:+ | gene-YDR163W_VR1 | rna-NM_001180470.3_VR1 | cds-NP_010447.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000007.1:21643-22170:+ | gene-YDR163W_ZTW1 | rna-NM_001180470.3_ZTW1 | cds-NP_010447.3_ZTW1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:765119-765640:+ | gene-YDR163W_Sparadoxus | rna-NM_001180470.3_Sparadoxus | cds-NP_010447.3_Sparadoxus | 82.8 | 98.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |