Gene name: CUE4
Reference locus (S288C): YML101C
Gene biotype: protein_coding
Description: Protein of unknown function; has a CUE domain that binds ubiquitin, which may facilitate intramolecular monoubiquitination; CUE4 has a paralog, CUE1, that arose from the whole genome duplication
Top 10 interactors (score): VHS2 (0.842); ATG3 (0.553); NPL4 (0.54); CDC48 (0.54); UBC7 (0.54); UFD1 (0.54); SSM4 (0.54); CUE1 (0.54); HRD1 (0.54); UBX2 (0.54); DER1 (0.54); USA1 (0.54); HRD3 (0.54); ILM1 (0.514); EMI2 (0.497); MUB1 (0.495); RAD18 (0.495); RAD6 (0.495); MMF1 (0.487); IMD3 (0.482)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:63455-63808:- | gene-YML101C_AKU4011 | rna-NM_001182462.1_AKU4011 | cds-NP_013607.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:412319-412672:+ | gene-YML101C_BG1 | rna-NM_001182462.1_BG1 | cds-NP_013607.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:69710-70063:- | gene-YML101C_Bruggeman | rna-NM_001182462.1_Bruggeman | cds-NP_013607.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:71269-71622:- | gene-YML101C_CAT1 | rna-NM_001182462.1_CAT1 | cds-NP_013607.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:63457-63810:- | gene-YML101C_CBS1585 | rna-NM_001182462.1_CBS1585 | cds-NP_013607.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:69449-69802:- | gene-YML101C_CBS436 | rna-NM_001182462.1_CBS436 | cds-NP_013607.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:64220-64573:- | gene-YML101C_CBS6412 | rna-NM_001182462.1_CBS6412 | cds-NP_013607.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:62684-63037:- | gene-YML101C_CBS6413 | rna-NM_001182462.1_CBS6413 | cds-NP_013607.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:64327-64680:- | gene-YML101C_CENPK1137D | rna-NM_001182462.1_CENPK1137D | cds-NP_013607.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:63961-64314:- | gene-YML101C_EthanolRed | rna-NM_001182462.1_EthanolRed | cds-NP_013607.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:64238-64591:- | gene-YML101C_FaliES1 | rna-NM_001182462.1_FaliES1 | cds-NP_013607.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000345.1:25590-25943:+ | gene-YML101C_JAY291 | rna-NM_001182462.1_JAY291 | cds-NP_013607.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:68155-68508:- | gene-YML101C_MUCL30387 | rna-NM_001182462.1_MUCL30387 | cds-NP_013607.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:71380-71733:- | gene-YML101C_MUCL30388 | rna-NM_001182462.1_MUCL30388 | cds-NP_013607.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:63471-63824:- | gene-YML101C_MUCL39482 | rna-NM_001182462.1_MUCL39482 | cds-NP_013607.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:68270-68623:- | gene-YML101C_MUCL42920 | rna-NM_001182462.1_MUCL42920 | cds-NP_013607.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:69689-70042:- | gene-YML101C_NCIM3186 | rna-NM_001182462.1_NCIM3186 | cds-NP_013607.1_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:64265-64618:- | gene-YML101C_NCYC1407 | rna-NM_001182462.1_NCYC1407 | cds-NP_013607.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:69699-70052:- | gene-YML101C_PE2H3 | rna-NM_001182462.1_PE2H3 | cds-NP_013607.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:69637-69990:- | gene-YML101C_PE2H4 | rna-NM_001182462.1_PE2H4 | cds-NP_013607.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:69735-70088:- | gene-YML101C_S288C | rna-NM_001182462.1_S288C | cds-NP_013607.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000054.1:61703-62056:- | gene-YML101C_SA1 | rna-NM_001182462.1_SA1 | cds-NP_013607.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:63534-63887:- | gene-YML101C_ThermosaccDry | rna-NM_001182462.1_ThermosaccDry | cds-NP_013607.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:67918-68271:- | gene-YML101C_VR1 | rna-NM_001182462.1_VR1 | cds-NP_013607.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:43035-43388:- | gene-YML101C_ZTW1 | rna-NM_001182462.1_ZTW1 | cds-NP_013607.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:74405-74758:- | gene-YML101C_Sparadoxus | rna-NM_001182462.1_Sparadoxus | cds-NP_013607.1_Sparadoxus | 87.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |