Gene name: CTS1
Reference locus (S288C): YLR286C
Gene biotype: protein_coding
Description: Endochitinase; required for cell separation after mitosis; transcriptional activation during the G1 phase of the cell cycle is mediated by transcription factor Ace2p
Top 10 interactors (score): DSE2 (0.994); CTS2 (0.993); SCW11 (0.98); SWI5 (0.98); DSE1 (0.979); EGT2 (0.977); DSE4 (0.956); EXG1 (0.955); ACE2 (0.944); CIS3 (0.943); SUN4 (0.942); CRH1 (0.915); CDC20 (0.905); CDA2 (0.904); CDA1 (0.901); YMR244W (0.896); YFL040W (0.895); SPR1 (0.894); AMA1 (0.887); HMX1 (0.885)
Homologues (species, bitscore): Ep400 (Mus musculus, 52.0); muc5.1 (Danio rerio, 94.4); Msp300 (Drosophila melanogaster, 57.4); CHIA (Arabidopsis thaliana, 164.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:657245-658933:- | gene-YLR286C_AKU4011 | rna-NM_001182173.1_AKU4011 | cds-NP_013388.1_AKU4011 | 97.9 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000170.1:73729-75387:+ | gene-YLR286C_BG1 | rna-NM_001182173.1_BG1 | cds-NP_013388.1_BG1 | 97.2 | 98.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:692234-693892:- | gene-YLR286C_Bruggeman | rna-NM_001182173.1_Bruggeman | cds-NP_013388.1_Bruggeman | 97.2 | 98.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:691055-692713:- | gene-YLR286C_CAT1 | rna-NM_001182173.1_CAT1 | cds-NP_013388.1_CAT1 | 97.2 | 98.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:692182-693870:- | gene-YLR286C_CBS1585 | rna-NM_001182173.1_CBS1585 | cds-NP_013388.1_CBS1585 | 97.9 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:676830-678488:- | gene-YLR286C_CBS436 | rna-NM_001182173.1_CBS436 | cds-NP_013388.1_CBS436 | 97.1 | 98.2 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:654816-656504:- | gene-YLR286C_CBS6412 | rna-NM_001182173.1_CBS6412 | cds-NP_013388.1_CBS6412 | 97.9 | 99.1 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:692846-694534:- | gene-YLR286C_CBS6413 | rna-NM_001182173.1_CBS6413 | cds-NP_013388.1_CBS6413 | 97.9 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:693047-694735:- | gene-YLR286C_CENPK1137D | rna-NM_001182173.1_CENPK1137D | cds-NP_013388.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:650555-652213:- | gene-YLR286C_EthanolRed | rna-NM_001182173.1_EthanolRed | cds-NP_013388.1_EthanolRed | 97.9 | 98.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:679755-681413:- | gene-YLR286C_FaliES1 | rna-NM_001182173.1_FaliES1 | cds-NP_013388.1_FaliES1 | 97.9 | 98.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000359.1:24331-25989:+ | gene-YLR286C_JAY291 | rna-NM_001182173.1_JAY291 | cds-NP_013388.1_JAY291 | 97.0 | 98.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:692374-694032:- | gene-YLR286C_MUCL30387 | rna-NM_001182173.1_MUCL30387 | cds-NP_013388.1_MUCL30387 | 97.1 | 98.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:697707-699365:- | gene-YLR286C_MUCL30388 | rna-NM_001182173.1_MUCL30388 | cds-NP_013388.1_MUCL30388 | 97.1 | 98.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:693413-695101:- | gene-YLR286C_MUCL39482 | rna-NM_001182173.1_MUCL39482 | cds-NP_013388.1_MUCL39482 | 97.9 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:688623-690281:- | gene-YLR286C_MUCL42920 | rna-NM_001182173.1_MUCL42920 | cds-NP_013388.1_MUCL42920 | 97.1 | 98.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:708422-710110:- | gene-YLR286C_NCIM3186 | rna-NM_001182173.1_NCIM3186 | cds-NP_013388.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:702745-704433:- | gene-YLR286C_NCYC1407 | rna-NM_001182173.1_NCYC1407 | cds-NP_013388.1_NCYC1407 | 97.9 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:690597-692255:- | gene-YLR286C_PE2H3 | rna-NM_001182173.1_PE2H3 | cds-NP_013388.1_PE2H3 | 97.0 | 98.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:690341-691999:- | gene-YLR286C_PE2H4 | rna-NM_001182173.1_PE2H4 | cds-NP_013388.1_PE2H4 | 97.0 | 98.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:708448-710136:- | gene-YLR286C_S288C | rna-NM_001182173.1_S288C | cds-NP_013388.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000039.1:74526-76184:+ | gene-YLR286C_SA1 | rna-NM_001182173.1_SA1 | cds-NP_013388.1_SA1 | 97.3 | 98.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:681651-683309:- | gene-YLR286C_ThermosaccDry | rna-NM_001182173.1_ThermosaccDry | cds-NP_013388.1_ThermosaccDry | 97.8 | 98.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:693548-695221:- | gene-YLR286C_VR1 | rna-NM_001182173.1_VR1 | cds-NP_013388.1_VR1 | 97.9 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000025.1:20057-21745:- | gene-YLR286C_ZTW1 | rna-NM_001182173.1_ZTW1 | cds-NP_013388.1_ZTW1 | 97.8 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:667765-669408:- | gene-YLR286C_Sparadoxus | rna-NM_001182173.1_Sparadoxus | cds-NP_013388.1_Sparadoxus | 87.2 | 97.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |