Gene name: CTR2
Reference locus (S288C): YHR175W
Gene biotype: protein_coding
Description: Solute carrier family 31 (copper transporter), member 1; Low-affinity copper transporter of the vacuolar membrane; mutation confers resistance to toxic copper concentrations, while overexpression confers resistance to copper starvation; regulated by nonsense-mediated mRNA decay pathway
Top 10 interactors (score): CTR3 (0.995); COX17 (0.959); CCC2 (0.954); MAC1 (0.948); FET4 (0.93); SOD1 (0.907); HAA1 (0.907); ATX1 (0.903); FET3 (0.846); CUP2 (0.815); FTR1 (0.808); SCO2 (0.782); FTH1 (0.759); CUP1-2 (0.757); CTR1 (0.755); FRE2 (0.748); FRE1 (0.743); FRE6 (0.733); ZRT1 (0.723); SMF3 (0.718)
Homologues (species, bitscore): SLC31A1 (Homo sapiens, 63.2); Slc31a1 (Mus musculus, 65.1); slc31a1 (Danio rerio, 67.0); Ctr1A (Drosophila melanogaster, 76.6); Y58A7A.1 (Caenorhabditis elegans, 58.9); COPT5 (Arabidopsis thaliana, 54.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:439969-440538:+ | gene-YHR175W_AKU4011 | rna-NM_001179306.3_AKU4011 | cds-NP_012045.3_AKU4011 | 98.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000141.1:77205-77774:- | gene-YHR175W_BG1 | rna-NM_001179306.3_BG1 | cds-NP_012045.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:447210-447779:+ | gene-YHR175W_Bruggeman | rna-NM_001179306.3_Bruggeman | cds-NP_012045.3_Bruggeman | 98.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:442611-443180:+ | gene-YHR175W_CAT1 | rna-NM_001179306.3_CAT1 | cds-NP_012045.3_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:439423-439992:+ | gene-YHR175W_CBS1585 | rna-NM_001179306.3_CBS1585 | cds-NP_012045.3_CBS1585 | 98.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:436863-437432:+ | gene-YHR175W_CBS436 | rna-NM_001179306.3_CBS436 | cds-NP_012045.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:439506-440075:+ | gene-YHR175W_CBS6412 | rna-NM_001179306.3_CBS6412 | cds-NP_012045.3_CBS6412 | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:440308-440877:+ | gene-YHR175W_CBS6413 | rna-NM_001179306.3_CBS6413 | cds-NP_012045.3_CBS6413 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:446053-446622:+ | gene-YHR175W_CENPK1137D | rna-NM_001179306.3_CENPK1137D | cds-NP_012045.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:498518-499087:+ | gene-YHR175W_EthanolRed | rna-NM_001179306.3_EthanolRed | cds-NP_012045.3_EthanolRed | 98.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:440961-441530:+ | gene-YHR175W_FaliES1 | rna-NM_001179306.3_FaliES1 | cds-NP_012045.3_FaliES1 | 98.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000376.1:13259-13828:- | gene-YHR175W_JAY291 | rna-NM_001179306.3_JAY291 | cds-NP_012045.3_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:448283-448852:+ | gene-YHR175W_MUCL30387 | rna-NM_001179306.3_MUCL30387 | cds-NP_012045.3_MUCL30387 | 98.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:447722-448291:+ | gene-YHR175W_MUCL30388 | rna-NM_001179306.3_MUCL30388 | cds-NP_012045.3_MUCL30388 | 98.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:439334-439903:+ | gene-YHR175W_MUCL39482 | rna-NM_001179306.3_MUCL39482 | cds-NP_012045.3_MUCL39482 | 98.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:445940-446509:+ | gene-YHR175W_MUCL42920 | rna-NM_001179306.3_MUCL42920 | cds-NP_012045.3_MUCL42920 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:452754-453323:+ | gene-YHR175W_NCIM3186 | rna-NM_001179306.3_NCIM3186 | cds-NP_012045.3_NCIM3186 | 98.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:441793-442362:+ | gene-YHR175W_NCYC1407 | rna-NM_001179306.3_NCYC1407 | cds-NP_012045.3_NCYC1407 | 98.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:440932-441501:+ | gene-YHR175W_PE2H3 | rna-NM_001179306.3_PE2H3 | cds-NP_012045.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:448359-448928:+ | gene-YHR175W_PE2H4 | rna-NM_001179306.3_PE2H4 | cds-NP_012045.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:452872-453441:+ | gene-YHR175W_S288C | rna-NM_001179306.3_S288C | cds-NP_012045.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000079.1:690-1259:+ | gene-YHR175W_SA1 | rna-NM_001179306.3_SA1 | cds-NP_012045.3_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:442044-442613:+ | gene-YHR175W_ThermosaccDry | rna-NM_001179306.3_ThermosaccDry | cds-NP_012045.3_ThermosaccDry | 98.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:449858-450427:+ | gene-YHR175W_VR1 | rna-NM_001179306.3_VR1 | cds-NP_012045.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:432285-432854:+ | gene-YHR175W_ZTW1 | rna-NM_001179306.3_ZTW1 | cds-NP_012045.3_ZTW1 | 98.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:438424-438994:+ | gene-YHR175W_Sparadoxus | rna-NM_001179306.3_Sparadoxus | cds-NP_012045.3_Sparadoxus | 90.4 | 99.4 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |