Gene name: CTP1
Reference locus (S288C): YBR291C
Gene biotype: protein_coding
Description: Tricarboxylate transport protein; Mitochondrial inner membrane citrate transporter; member of the mitochondrial carrier family
Top 10 interactors (score): FSF1 (0.921); ECT1 (0.879); DIC1 (0.868); SSH1 (0.813); PDX1 (0.794); MAE1 (0.785); LSC1 (0.764); SPO11 (0.75); IDH1 (0.729); ZWF1 (0.702); EXO1 (0.695); MRPL27 (0.692); CIT2 (0.686); YGR127W (0.681); PRS5 (0.669); PDA1 (0.65); ARO3 (0.641); PDB1 (0.634); YAT1 (0.604); ARO2 (0.597)
Homologues (species, bitscore): SLC25A1 (Homo sapiens, 213.4); Slc25a1 (Mus musculus, 208.8); slc25a1b (Danio rerio, 211.8); slc25a1 (Xenopus tropicalis, 199.9); sea (Drosophila melanogaster, 197.6); K11H3.3 (Caenorhabditis elegans, 193.4); mSFC1 (Arabidopsis thaliana, 139.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:767999-768898:- | gene-YBR291C_AKU4011 | rna-NM_001178639.1_AKU4011 | cds-NP_009850.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000066.1:138996-139895:- | gene-YBR291C_BG1 | rna-NM_001178639.1_BG1 | cds-NP_009850.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:769077-769976:- | gene-YBR291C_Bruggeman | rna-NM_001178639.1_Bruggeman | cds-NP_009850.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:772830-773729:- | gene-YBR291C_CAT1 | rna-NM_001178639.1_CAT1 | cds-NP_009850.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:759565-760464:- | gene-YBR291C_CBS1585 | rna-NM_001178639.1_CBS1585 | cds-NP_009850.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:765958-766857:- | gene-YBR291C_CBS436 | rna-NM_001178639.1_CBS436 | cds-NP_009850.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:854115-855014:- | gene-YBR291C_CBS6412 | rna-NM_001178639.1_CBS6412 | cds-NP_009850.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:765596-766495:- | gene-YBR291C_CBS6413 | rna-NM_001178639.1_CBS6413 | cds-NP_009850.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:777572-778471:- | gene-YBR291C_CENPK1137D | rna-NM_001178639.1_CENPK1137D | cds-NP_009850.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:891032-891931:- | gene-YBR291C_EthanolRed | rna-NM_001178639.1_EthanolRed | cds-NP_009850.1_EthanolRed | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:784379-785278:- | gene-YBR291C_FaliES1 | rna-NM_001178639.1_FaliES1 | cds-NP_009850.1_FaliES1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000067.1:18897-19796:+ | gene-YBR291C_JAY291 | rna-NM_001178639.1_JAY291 | cds-NP_009850.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:771142-772041:- | gene-YBR291C_MUCL30387 | rna-NM_001178639.1_MUCL30387 | cds-NP_009850.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:788229-789128:- | gene-YBR291C_MUCL30388 | rna-NM_001178639.1_MUCL30388 | cds-NP_009850.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:757872-758771:- | gene-YBR291C_MUCL39482 | rna-NM_001178639.1_MUCL39482 | cds-NP_009850.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:767688-768587:- | gene-YBR291C_MUCL42920 | rna-NM_001178639.1_MUCL42920 | cds-NP_009850.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:783470-784369:- | gene-YBR291C_NCIM3186 | rna-NM_001178639.1_NCIM3186 | cds-NP_009850.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:759761-760660:- | gene-YBR291C_NCYC1407 | rna-NM_001178639.1_NCYC1407 | cds-NP_009850.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:782856-783755:- | gene-YBR291C_PE2H3 | rna-NM_001178639.1_PE2H3 | cds-NP_009850.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:780532-781431:- | gene-YBR291C_PE2H4 | rna-NM_001178639.1_PE2H4 | cds-NP_009850.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:783673-784572:- | gene-YBR291C_S288C | rna-NM_001178639.1_S288C | cds-NP_009850.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000019.1:138812-139711:- | gene-YBR291C_SA1 | rna-NM_001178639.1_SA1 | cds-NP_009850.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:783371-784270:- | gene-YBR291C_ThermosaccDry | rna-NM_001178639.1_ThermosaccDry | cds-NP_009850.1_ThermosaccDry | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:763556-764455:- | gene-YBR291C_VR1 | rna-NM_001178639.1_VR1 | cds-NP_009850.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:756189-757088:- | gene-YBR291C_ZTW1 | rna-NM_001178639.1_ZTW1 | cds-NP_009850.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:800004-800903:- | gene-YBR291C_Sparadoxus | rna-NM_001178639.1_Sparadoxus | cds-NP_009850.1_Sparadoxus | 90.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |