Gene name: CTM1
Reference locus (S288C): YHR109W
Gene biotype: protein_coding
Description: [cytochrome c]-lysine n-methyltransferase; Cytochrome c lysine methyltransferase; trimethylates residue 72 of apo-cytochrome c (Cyc1p) in the cytosol; not required for normal respiratory growth
Top 10 interactors (score): SET2 (0.964); SET1 (0.943); CYC3 (0.92); DOT1 (0.91); ILV1 (0.908); CYC7 (0.908); RKM1 (0.813); CYC1 (0.78); SET6 (0.76); MTQ1 (0.758); YKL162C (0.75); RMT2 (0.747); EFM1 (0.747); RKM2 (0.746); TAE1 (0.711); RSM22 (0.692); OMS1 (0.68); SET4 (0.674); RKM4 (0.671); PUF3 (0.669)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:317230-318987:+ | gene-YHR109W_AKU4011 | rna-NM_001179239.1_AKU4011 | cds-NP_011977.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000141.1:198922-200679:- | gene-YHR109W_BG1 | rna-NM_001179239.1_BG1 | cds-NP_011977.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:324524-326281:+ | gene-YHR109W_Bruggeman | rna-NM_001179239.1_Bruggeman | cds-NP_011977.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:319665-321422:+ | gene-YHR109W_CAT1 | rna-NM_001179239.1_CAT1 | cds-NP_011977.1_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:316253-318010:+ | gene-YHR109W_CBS1585 | rna-NM_001179239.1_CBS1585 | cds-NP_011977.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:313608-315365:+ | gene-YHR109W_CBS436 | rna-NM_001179239.1_CBS436 | cds-NP_011977.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:318063-319820:+ | gene-YHR109W_CBS6412 | rna-NM_001179239.1_CBS6412 | cds-NP_011977.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:317281-319038:+ | gene-YHR109W_CBS6413 | rna-NM_001179239.1_CBS6413 | cds-NP_011977.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:323481-325238:+ | gene-YHR109W_CENPK1137D | rna-NM_001179239.1_CENPK1137D | cds-NP_011977.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:376138-377895:+ | gene-YHR109W_EthanolRed | rna-NM_001179239.1_EthanolRed | cds-NP_011977.1_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:317626-319383:+ | gene-YHR109W_FaliES1 | rna-NM_001179239.1_FaliES1 | cds-NP_011977.1_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000045.1:38205-39962:+ | gene-YHR109W_JAY291 | rna-NM_001179239.1_JAY291 | cds-NP_011977.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:324248-326005:+ | gene-YHR109W_MUCL30387 | rna-NM_001179239.1_MUCL30387 | cds-NP_011977.1_MUCL30387 | 99.6 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:323902-325659:+ | gene-YHR109W_MUCL30388 | rna-NM_001179239.1_MUCL30388 | cds-NP_011977.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:316594-318351:+ | gene-YHR109W_MUCL39482 | rna-NM_001179239.1_MUCL39482 | cds-NP_011977.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:322840-324597:+ | gene-YHR109W_MUCL42920 | rna-NM_001179239.1_MUCL42920 | cds-NP_011977.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:330192-331949:+ | gene-YHR109W_NCIM3186 | rna-NM_001179239.1_NCIM3186 | cds-NP_011977.1_NCIM3186 | 96.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:318803-320560:+ | gene-YHR109W_NCYC1407 | rna-NM_001179239.1_NCYC1407 | cds-NP_011977.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:318241-319998:+ | gene-YHR109W_PE2H3 | rna-NM_001179239.1_PE2H3 | cds-NP_011977.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:325668-327425:+ | gene-YHR109W_PE2H4 | rna-NM_001179239.1_PE2H4 | cds-NP_011977.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:330310-332067:+ | gene-YHR109W_S288C | rna-NM_001179239.1_S288C | cds-NP_011977.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000014.1:26909-28666:- | gene-YHR109W_SA1 | rna-NM_001179239.1_SA1 | cds-NP_011977.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:318709-320466:+ | gene-YHR109W_ThermosaccDry | rna-NM_001179239.1_ThermosaccDry | cds-NP_011977.1_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:326329-328086:+ | gene-YHR109W_VR1 | rna-NM_001179239.1_VR1 | cds-NP_011977.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:309745-311502:+ | gene-YHR109W_ZTW1 | rna-NM_001179239.1_ZTW1 | cds-NP_011977.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:315391-317148:+ | gene-YHR109W_Sparadoxus | rna-NM_001179239.1_Sparadoxus | cds-NP_011977.1_Sparadoxus | 85.0 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |