Gene name: CTF8
Reference locus (S288C): YHR191C
Gene biotype: protein_coding
Description: Chromosome transmission fidelity protein 8; Subunit of a complex with Ctf18p; shares some subunits with Replication Factor C; required for sister chromatid cohesion; Belongs to the CTF8 family
Top 10 interactors (score): CTF18 (0.999); DCC1 (0.999); CHL1 (0.959); CSM3 (0.938); TOF1 (0.936); CTF4 (0.934); RFC5 (0.9); ECO1 (0.871); MAD2 (0.865); MRC1 (0.863); POL2 (0.857); RFC2 (0.851); VIK1 (0.849); BIM1 (0.835); RFC4 (0.834); RFC3 (0.802); RAD24 (0.784); CLB2 (0.777); CIN1 (0.776); MAD1 (0.774)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:473310-473711:- | gene-YHR191C_AKU4011 | rna-NM_001179322.3_AKU4011 | cds-NP_012061.3_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000141.1:44038-44439:+ | gene-YHR191C_BG1 | rna-NM_001179322.3_BG1 | cds-NP_012061.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:480552-480953:- | gene-YHR191C_Bruggeman | rna-NM_001179322.3_Bruggeman | cds-NP_012061.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:476833-477234:- | gene-YHR191C_CAT1 | rna-NM_001179322.3_CAT1 | cds-NP_012061.3_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:472762-473163:- | gene-YHR191C_CBS1585 | rna-NM_001179322.3_CBS1585 | cds-NP_012061.3_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:470702-471103:- | gene-YHR191C_CBS436 | rna-NM_001179322.3_CBS436 | cds-NP_012061.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:472861-473262:- | gene-YHR191C_CBS6412 | rna-NM_001179322.3_CBS6412 | cds-NP_012061.3_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:474152-474553:- | gene-YHR191C_CBS6413 | rna-NM_001179322.3_CBS6413 | cds-NP_012061.3_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:479418-479819:- | gene-YHR191C_CENPK1137D | rna-NM_001179322.3_CENPK1137D | cds-NP_012061.3_CENPK1137D | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:531849-532250:- | gene-YHR191C_EthanolRed | rna-NM_001179322.3_EthanolRed | cds-NP_012061.3_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:474293-474694:- | gene-YHR191C_FaliES1 | rna-NM_001179322.3_FaliES1 | cds-NP_012061.3_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000147.1:19453-19854:- | gene-YHR191C_JAY291 | rna-NM_001179322.3_JAY291 | cds-NP_012061.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:481878-482279:- | gene-YHR191C_MUCL30387 | rna-NM_001179322.3_MUCL30387 | cds-NP_012061.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:481301-481702:- | gene-YHR191C_MUCL30388 | rna-NM_001179322.3_MUCL30388 | cds-NP_012061.3_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:472673-473074:- | gene-YHR191C_MUCL39482 | rna-NM_001179322.3_MUCL39482 | cds-NP_012061.3_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:480617-481018:- | gene-YHR191C_MUCL42920 | rna-NM_001179322.3_MUCL42920 | cds-NP_012061.3_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:486112-486513:- | gene-YHR191C_NCIM3186 | rna-NM_001179322.3_NCIM3186 | cds-NP_012061.3_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:475136-475537:- | gene-YHR191C_NCYC1407 | rna-NM_001179322.3_NCYC1407 | cds-NP_012061.3_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:474292-474693:- | gene-YHR191C_PE2H3 | rna-NM_001179322.3_PE2H3 | cds-NP_012061.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:481719-482120:- | gene-YHR191C_PE2H4 | rna-NM_001179322.3_PE2H4 | cds-NP_012061.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:486230-486631:- | gene-YHR191C_S288C | rna-NM_001179322.3_S288C | cds-NP_012061.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000079.1:34379-34780:- | gene-YHR191C_SA1 | rna-NM_001179322.3_SA1 | cds-NP_012061.3_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:475376-475777:- | gene-YHR191C_ThermosaccDry | rna-NM_001179322.3_ThermosaccDry | cds-NP_012061.3_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:484594-484995:- | gene-YHR191C_VR1 | rna-NM_001179322.3_VR1 | cds-NP_012061.3_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:465611-466012:- | gene-YHR191C_ZTW1 | rna-NM_001179322.3_ZTW1 | cds-NP_012061.3_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:472315-472716:- | gene-YHR191C_Sparadoxus | rna-NM_001179322.3_Sparadoxus | cds-NP_012061.3_Sparadoxus | 90.0 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |