Gene name: CTF13
Reference locus (S288C): YMR094W
Gene biotype: protein_coding
Description: Centromere dna-binding protein complex cbf3 subunit c; Subunit of the CBF3 complex; CBF3 binds to the CDE III element of centromeres, bending the DNA upon binding, and may be involved in sister chromatid cohesion during mitosis
Top 10 interactors (score): CEP3 (0.999); SKP1 (0.999); CBF2 (0.999); CBF1 (0.952); CSE4 (0.938); CHL4 (0.91); SGT1 (0.901); OGG1 (0.9); CTF19 (0.896); MCM21 (0.816); MAD2 (0.814); OKP1 (0.797); MCM16 (0.759); SPC25 (0.747); CTF3 (0.745); SKP2 (0.745); DSN1 (0.745); NUF2 (0.731); STS1 (0.726); BIR1 (0.722)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:493762-495198:+ | gene-YMR094W_AKU4011 | rna-NM_001182594.1_AKU4011 | cds-NP_013812.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:47811-49247:- | gene-YMR094W_BG1 | rna-NM_001182594.1_BG1 | cds-NP_013812.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:436190-437626:+ | gene-YMR094W_Bruggeman | rna-NM_001182594.1_Bruggeman | cds-NP_013812.1_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:436513-437949:+ | gene-YMR094W_CAT1 | rna-NM_001182594.1_CAT1 | cds-NP_013812.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:426705-428141:+ | gene-YMR094W_CBS1585 | rna-NM_001182594.1_CBS1585 | cds-NP_013812.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:432030-433466:+ | gene-YMR094W_CBS436 | rna-NM_001182594.1_CBS436 | cds-NP_013812.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:539801-541237:+ | gene-YMR094W_CBS6412 | rna-NM_001182594.1_CBS6412 | cds-NP_013812.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:425962-427398:+ | gene-YMR094W_CBS6413 | rna-NM_001182594.1_CBS6413 | cds-NP_013812.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:449933-451369:+ | gene-YMR094W_CENPK1137D | rna-NM_001182594.1_CENPK1137D | cds-NP_013812.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:426596-428032:+ | gene-YMR094W_EthanolRed | rna-NM_001182594.1_EthanolRed | cds-NP_013812.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:429762-431198:+ | gene-YMR094W_FaliES1 | rna-NM_001182594.1_FaliES1 | cds-NP_013812.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000033.1:6015-7451:- | gene-YMR094W_JAY291 | rna-NM_001182594.1_JAY291 | cds-NP_013812.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:433121-434557:+ | gene-YMR094W_MUCL30387 | rna-NM_001182594.1_MUCL30387 | cds-NP_013812.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:437108-438544:+ | gene-YMR094W_MUCL30388 | rna-NM_001182594.1_MUCL30388 | cds-NP_013812.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:427014-428450:+ | gene-YMR094W_MUCL39482 | rna-NM_001182594.1_MUCL39482 | cds-NP_013812.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:433679-435115:+ | gene-YMR094W_MUCL42920 | rna-NM_001182594.1_MUCL42920 | cds-NP_013812.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:455779-457215:+ | gene-YMR094W_NCIM3186 | rna-NM_001182594.1_NCIM3186 | cds-NP_013812.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:426907-428343:+ | gene-YMR094W_NCYC1407 | rna-NM_001182594.1_NCYC1407 | cds-NP_013812.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:432628-434064:+ | gene-YMR094W_PE2H3 | rna-NM_001182594.1_PE2H3 | cds-NP_013812.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:438723-440159:+ | gene-YMR094W_PE2H4 | rna-NM_001182594.1_PE2H4 | cds-NP_013812.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:455825-457261:+ | gene-YMR094W_S288C | rna-NM_001182594.1_S288C | cds-NP_013812.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000005.1:92905-94341:- | gene-YMR094W_SA1 | rna-NM_001182594.1_SA1 | cds-NP_013812.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:427565-429001:+ | gene-YMR094W_ThermosaccDry | rna-NM_001182594.1_ThermosaccDry | cds-NP_013812.1_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:439214-440650:+ | gene-YMR094W_VR1 | rna-NM_001182594.1_VR1 | cds-NP_013812.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:403836-405272:+ | gene-YMR094W_ZTW1 | rna-NM_001182594.1_ZTW1 | cds-NP_013812.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:440298-441737:+ | gene-YMR094W_Sparadoxus | rna-NM_001182594.1_Sparadoxus | cds-NP_013812.1_Sparadoxus | 88.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |