CST26 (YBR042C)


Gene profile

Gene name: CST26
Reference locus (S288C): YBR042C
Gene biotype: protein_coding

Description: Uncharacterized acyltransferase CST26; Acyltransferase; enzyme mainly responsible for the introduction of saturated very long chain fatty acids into neo-synthesized molecules of phosphatidylinositol; required for incorporation of stearic acid into phosphatidylinositol; affects chromosome stability when overexpressed; CST26 has a paralog, YDR018C, that arose from the whole genome duplication

Top 10 interactors (score): ALE1 (0.929); TAZ1 (0.908); SLC1 (0.897); SCT1 (0.83); DGA1 (0.808); PAH1 (0.801); GPT2 (0.748); LRO1 (0.74); CLD1 (0.718); LOA1 (0.705); CRD1 (0.705); PCT1 (0.704); GPC1 (0.695); GUP1 (0.676); YJR029W (0.673); YER160C (0.673); PIS1 (0.672); GDE1 (0.667); TGL3 (0.666); CDS1 (0.646)

Homologues (species, bitscore): AGPAT4 (Homo sapiens, 104.0); Agpat4 (Mus musculus, 105.1); agpat3 (Danio rerio, 92.0); agpat3 (Xenopus tropicalis, 94.4); CG4729 (Drosophila melanogaster, 77.8); bus-18 (Caenorhabditis elegans, 97.8); LPAT5 (Arabidopsis thaliana, 119.4)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005296.1:302844-304037:- gene-YBR042C_AKU4011 rna-NM_001178390.1_AKU4011 cds-NP_009598.1_AKU4011 99.6 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000179.1:293010-294203:- gene-YBR042C_BG1 rna-NM_001178390.1_BG1 cds-NP_009598.1_BG1 98.9 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005504.1:303579-304772:- gene-YBR042C_Bruggeman rna-NM_001178390.1_Bruggeman cds-NP_009598.1_Bruggeman 98.8 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005520.1:307270-308463:- gene-YBR042C_CAT1 rna-NM_001178390.1_CAT1 cds-NP_009598.1_CAT1 99.0 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005360.1:295141-296334:- gene-YBR042C_CBS1585 rna-NM_001178390.1_CBS1585 cds-NP_009598.1_CBS1585 99.6 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005344.1:303150-304343:- gene-YBR042C_CBS436 rna-NM_001178390.1_CBS436 cds-NP_009598.1_CBS436 98.8 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005328.1:393024-394217:- gene-YBR042C_CBS6412 rna-NM_001178390.1_CBS6412 cds-NP_009598.1_CBS6412 99.6 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005312.1:300258-301451:- gene-YBR042C_CBS6413 rna-NM_001178390.1_CBS6413 cds-NP_009598.1_CBS6413 99.6 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001523.1:314176-315369:- gene-YBR042C_CENPK1137D rna-NM_001178390.1_CENPK1137D cds-NP_009598.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005472.1:429621-430814:- gene-YBR042C_EthanolRed rna-NM_001178390.1_EthanolRed cds-NP_009598.1_EthanolRed 99.9 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005536.1:318471-319664:- gene-YBR042C_FaliES1 rna-NM_001178390.1_FaliES1 cds-NP_009598.1_FaliES1 99.7 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000441.1:12054-13247:+ gene-YBR042C_JAY291 rna-NM_001178390.1_JAY291 cds-NP_009598.1_JAY291 98.9 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005408.1:305204-306397:- gene-YBR042C_MUCL30387 rna-NM_001178390.1_MUCL30387 cds-NP_009598.1_MUCL30387 98.7 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005440.1:304989-306182:- gene-YBR042C_MUCL30388 rna-NM_001178390.1_MUCL30388 cds-NP_009598.1_MUCL30388 98.8 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005280.1:295129-296322:- gene-YBR042C_MUCL39482 rna-NM_001178390.1_MUCL39482 cds-NP_009598.1_MUCL39482 99.6 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005424.1:302330-303523:- gene-YBR042C_MUCL42920 rna-NM_001178390.1_MUCL42920 cds-NP_009598.1_MUCL42920 98.8 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011811.1:320213-321406:- gene-YBR042C_NCIM3186 rna-NM_001178390.1_NCIM3186 cds-NP_009598.1_NCIM3186 98.7 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005264.1:296041-297234:- gene-YBR042C_NCYC1407 rna-NM_001178390.1_NCYC1407 cds-NP_009598.1_NCYC1407 99.6 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994141.1:308216-309409:- gene-YBR042C_PE2H3 rna-NM_001178390.1_PE2H3 cds-NP_009598.1_PE2H3 98.9 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999873.1:305892-307085:- gene-YBR042C_PE2H4 rna-NM_001178390.1_PE2H4 cds-NP_009598.1_PE2H4 98.9 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001134.8:320416-321609:- gene-YBR042C_S288C rna-NM_001178390.1_S288C cds-NP_009598.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000017.1:155934-157127:+ gene-YBR042C_SA1 rna-NM_001178390.1_SA1 cds-NP_009598.1_SA1 98.8 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005488.1:317912-319105:- gene-YBR042C_ThermosaccDry rna-NM_001178390.1_ThermosaccDry cds-NP_009598.1_ThermosaccDry 99.9 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005456.1:299569-300762:- gene-YBR042C_VR1 rna-NM_001178390.1_VR1 cds-NP_009598.1_VR1 98.8 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000003.1:293639-294832:- gene-YBR042C_ZTW1 rna-NM_001178390.1_ZTW1 cds-NP_009598.1_ZTW1 99.2 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047488.1:329851-331044:- gene-YBR042C_Sparadoxus rna-NM_001178390.1_Sparadoxus cds-NP_009598.1_Sparadoxus 89.3 100.0 Verified 1 1 1 False True False False False

Additional files