Gene name: CSR2
Reference locus (S288C): YPR030W
Gene biotype: protein_coding
Description: Arrestin-related trafficking adapter 2/8; Transcription factor CSR2; Nuclear ubiquitin protein ligase binding protein; may regulate utilization of nonfermentable carbon sources and endocytosis of plasma membrane proteins; overproduction suppresses chs5 spa2 lethality at high temp; ubiquitinated by Rsp5p, deubiquitinated by Ubp2p; CSR2 has a paralog, ECM21, that arose from the whole genome duplication
Top 10 interactors (score): RSP5 (0.963); ROG3 (0.846); LDB19 (0.813); ROD1 (0.806); BMH2 (0.797); RIM8 (0.767); ART10 (0.766); UBP2 (0.718); ART5 (0.716); JEN1 (0.709); BUL2 (0.696); SMF1 (0.695); SPO23 (0.694); CHS3 (0.691); HXT6 (0.676); YMR206W (0.672); BUL1 (0.651); YPR078C (0.611); ISF1 (0.598); RCR2 (0.587)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:599508-602873:+ | gene-YPR030W_AKU4011 | rna-NM_001184127.1_AKU4011 | cds-NP_015355.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:294760-298125:- | gene-YPR030W_BG1 | rna-NM_001184127.1_BG1 | cds-NP_015355.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:677169-680534:+ | gene-YPR030W_Bruggeman | rna-NM_001184127.1_Bruggeman | cds-NP_015355.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:720169-723534:+ | gene-YPR030W_CAT1 | rna-NM_001184127.1_CAT1 | cds-NP_015355.1_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:603192-606557:+ | gene-YPR030W_CBS1585 | rna-NM_001184127.1_CBS1585 | cds-NP_015355.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:617589-620954:+ | gene-YPR030W_CBS436 | rna-NM_001184127.1_CBS436 | cds-NP_015355.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:606940-610305:+ | gene-YPR030W_CBS6412 | rna-NM_001184127.1_CBS6412 | cds-NP_015355.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:600139-603504:+ | gene-YPR030W_CBS6413 | rna-NM_001184127.1_CBS6413 | cds-NP_015355.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:627857-631222:+ | gene-YPR030W_CENPK1137D | rna-NM_001184127.1_CENPK1137D | cds-NP_015355.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:597438-600803:+ | gene-YPR030W_EthanolRed | rna-NM_001184127.1_EthanolRed | cds-NP_015355.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:605241-608606:+ | gene-YPR030W_FaliES1 | rna-NM_001184127.1_FaliES1 | cds-NP_015355.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000116.1:19278-22643:- | gene-YPR030W_JAY291 | rna-NM_001184127.1_JAY291 | cds-NP_015355.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:618381-621746:+ | gene-YPR030W_MUCL30387 | rna-NM_001184127.1_MUCL30387 | cds-NP_015355.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:617062-620427:+ | gene-YPR030W_MUCL30388 | rna-NM_001184127.1_MUCL30388 | cds-NP_015355.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:596449-599814:+ | gene-YPR030W_MUCL39482 | rna-NM_001184127.1_MUCL39482 | cds-NP_015355.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:659257-662622:+ | gene-YPR030W_MUCL42920 | rna-NM_001184127.1_MUCL42920 | cds-NP_015355.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:627863-631228:+ | gene-YPR030W_NCIM3186 | rna-NM_001184127.1_NCIM3186 | cds-NP_015355.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:604380-607745:+ | gene-YPR030W_NCYC1407 | rna-NM_001184127.1_NCYC1407 | cds-NP_015355.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:610641-614006:+ | gene-YPR030W_PE2H3 | rna-NM_001184127.1_PE2H3 | cds-NP_015355.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:610289-613654:+ | gene-YPR030W_PE2H4 | rna-NM_001184127.1_PE2H4 | cds-NP_015355.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:627880-631245:+ | gene-YPR030W_S288C | rna-NM_001184127.1_S288C | cds-NP_015355.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000026.1:69530-72895:- | gene-YPR030W_SA1 | rna-NM_001184127.1_SA1 | cds-NP_015355.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:605041-608406:+ | gene-YPR030W_ThermosaccDry | rna-NM_001184127.1_ThermosaccDry | cds-NP_015355.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:621302-624667:+ | gene-YPR030W_VR1 | rna-NM_001184127.1_VR1 | cds-NP_015355.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:604361-607726:+ | gene-YPR030W_ZTW1 | rna-NM_001184127.1_ZTW1 | cds-NP_015355.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:605171-608536:+ | gene-YPR030W_Sparadoxus | rna-NM_001184127.1_Sparadoxus | cds-NP_015355.1_Sparadoxus | 87.2 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |