Gene name: CSI2
Reference locus (S288C): YOL007C
Gene biotype: protein_coding
Description: Chitin synthase 3 complex protein CSI2; Protein of unknown function; green fluorescent protein (GFP)- fusion protein localizes to the mother side of the bud neck and the vacuole; YOL007C is not an essential gene
Top 10 interactors (score): CSI1 (0.766); TOS6 (0.762); AXL2 (0.715); CLN2 (0.651); SVS1 (0.647); PRY2 (0.631); RCR1 (0.611); KRE9 (0.611); CLN1 (0.599); MSB1 (0.571); YPS5 (0.569); TOS4 (0.553); MSA2 (0.528); SDP1 (0.526); YOX1 (0.501); CHS2 (0.452); MSA1 (0.45); NCW2 (0.45); CLA4 (0.404)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:295706-296731:- | gene-YOL007C_AKU4011 | rna-NM_001183261.1_AKU4011 | cds-NP_014636.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000152.1:111315-112340:- | gene-YOL007C_BG1 | rna-NM_001183261.1_BG1 | cds-NP_014636.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:298521-299546:- | gene-YOL007C_Bruggeman | rna-NM_001183261.1_Bruggeman | cds-NP_014636.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:296660-297685:- | gene-YOL007C_CAT1 | rna-NM_001183261.1_CAT1 | cds-NP_014636.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:290382-291407:- | gene-YOL007C_CBS1585 | rna-NM_001183261.1_CBS1585 | cds-NP_014636.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:294648-295673:- | gene-YOL007C_CBS436 | rna-NM_001183261.1_CBS436 | cds-NP_014636.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:289733-290758:- | gene-YOL007C_CBS6412 | rna-NM_001183261.1_CBS6412 | cds-NP_014636.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:297266-298291:- | gene-YOL007C_CBS6413 | rna-NM_001183261.1_CBS6413 | cds-NP_014636.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:311081-312106:- | gene-YOL007C_CENPK1137D | rna-NM_001183261.1_CENPK1137D | cds-NP_014636.1_CENPK1137D | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:292518-293543:- | gene-YOL007C_EthanolRed | rna-NM_001183261.1_EthanolRed | cds-NP_014636.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:295845-296870:- | gene-YOL007C_FaliES1 | rna-NM_001183261.1_FaliES1 | cds-NP_014636.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000015.1:32393-33418:+ | gene-YOL007C_JAY291 | rna-NM_001183261.1_JAY291 | cds-NP_014636.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:302730-303755:- | gene-YOL007C_MUCL30387 | rna-NM_001183261.1_MUCL30387 | cds-NP_014636.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:306168-307193:- | gene-YOL007C_MUCL30388 | rna-NM_001183261.1_MUCL30388 | cds-NP_014636.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:297865-298890:- | gene-YOL007C_MUCL39482 | rna-NM_001183261.1_MUCL39482 | cds-NP_014636.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:312778-313803:- | gene-YOL007C_MUCL42920 | rna-NM_001183261.1_MUCL42920 | cds-NP_014636.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:311231-312256:- | gene-YOL007C_NCIM3186 | rna-NM_001183261.1_NCIM3186 | cds-NP_014636.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:304598-305623:- | gene-YOL007C_NCYC1407 | rna-NM_001183261.1_NCYC1407 | cds-NP_014636.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:299237-300262:- | gene-YOL007C_PE2H3 | rna-NM_001183261.1_PE2H3 | cds-NP_014636.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:309636-310661:- | gene-YOL007C_PE2H4 | rna-NM_001183261.1_PE2H4 | cds-NP_014636.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:311342-312367:- | gene-YOL007C_S288C | rna-NM_001183261.1_S288C | cds-NP_014636.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000001.1:279324-280349:- | gene-YOL007C_SA1 | rna-NM_001183261.1_SA1 | cds-NP_014636.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:294416-295441:- | gene-YOL007C_ThermosaccDry | rna-NM_001183261.1_ThermosaccDry | cds-NP_014636.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:295199-296224:- | gene-YOL007C_VR1 | rna-NM_001183261.1_VR1 | cds-NP_014636.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:29082-30107:- | gene-YOL007C_ZTW1 | rna-NM_001183261.1_ZTW1 | cds-NP_014636.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:302700-303728:- | gene-YOL007C_Sparadoxus | rna-NM_001183261.1_Sparadoxus | cds-NP_014636.1_Sparadoxus | 88.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |