Gene name: CSE2
Reference locus (S288C): YNR010W
Gene biotype: protein_coding
Description: Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; component of the Middle domain of mediator; required for regulation of RNA polymerase II activity; relocalizes to the cytosol in response to hypoxia
Top 10 interactors (score): MED1 (0.999); SRB4 (0.999); RGR1 (0.999); NUT2 (0.999); SRB5 (0.999); ROX3 (0.999); MED4 (0.999); MED7 (0.999); SRB2 (0.998); MED8 (0.998); SOH1 (0.998); MED11 (0.998); SRB6 (0.998); MED6 (0.997); SRB7 (0.996); GAL11 (0.994); MED2 (0.992); SIN4 (0.991); PGD1 (0.99); NUT1 (0.978)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:627328-627777:+ | gene-YNR010W_AKU4011 | rna-NM_001183187.3_AKU4011 | cds-NP_014407.3_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:535182-535631:+ | gene-YNR010W_BG1 | rna-NM_001183187.3_BG1 | cds-NP_014407.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:644819-645268:+ | gene-YNR010W_Bruggeman | rna-NM_001183187.3_Bruggeman | cds-NP_014407.3_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:679045-679494:+ | gene-YNR010W_CAT1 | rna-NM_001183187.3_CAT1 | cds-NP_014407.3_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:633124-633573:+ | gene-YNR010W_CBS1585 | rna-NM_001183187.3_CBS1585 | cds-NP_014407.3_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:694818-695267:+ | gene-YNR010W_CBS436 | rna-NM_001183187.3_CBS436 | cds-NP_014407.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:622690-623139:+ | gene-YNR010W_CBS6412 | rna-NM_001183187.3_CBS6412 | cds-NP_014407.3_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:624018-624467:+ | gene-YNR010W_CBS6413 | rna-NM_001183187.3_CBS6413 | cds-NP_014407.3_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:637430-637879:+ | gene-YNR010W_CENPK1137D | rna-NM_001183187.3_CENPK1137D | cds-NP_014407.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:629248-629697:+ | gene-YNR010W_EthanolRed | rna-NM_001183187.3_EthanolRed | cds-NP_014407.3_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:620266-620715:+ | gene-YNR010W_FaliES1 | rna-NM_001183187.3_FaliES1 | cds-NP_014407.3_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000037.1:82028-82477:- | gene-YNR010W_JAY291 | rna-NM_001183187.3_JAY291 | cds-NP_014407.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:642573-643022:+ | gene-YNR010W_MUCL30387 | rna-NM_001183187.3_MUCL30387 | cds-NP_014407.3_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:683405-683854:+ | gene-YNR010W_MUCL30388 | rna-NM_001183187.3_MUCL30388 | cds-NP_014407.3_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:624632-625081:+ | gene-YNR010W_MUCL39482 | rna-NM_001183187.3_MUCL39482 | cds-NP_014407.3_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:628814-629263:+ | gene-YNR010W_MUCL42920 | rna-NM_001183187.3_MUCL42920 | cds-NP_014407.3_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:643713-644162:+ | gene-YNR010W_NCIM3186 | rna-NM_001183187.3_NCIM3186 | cds-NP_014407.3_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:627134-627583:+ | gene-YNR010W_NCYC1407 | rna-NM_001183187.3_NCYC1407 | cds-NP_014407.3_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:628223-628672:+ | gene-YNR010W_PE2H3 | rna-NM_001183187.3_PE2H3 | cds-NP_014407.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:629541-629990:+ | gene-YNR010W_PE2H4 | rna-NM_001183187.3_PE2H4 | cds-NP_014407.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:643744-644193:+ | gene-YNR010W_S288C | rna-NM_001183187.3_S288C | cds-NP_014407.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000068.1:41448-41897:+ | gene-YNR010W_SA1 | rna-NM_001183187.3_SA1 | cds-NP_014407.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:620606-621055:+ | gene-YNR010W_ThermosaccDry | rna-NM_001183187.3_ThermosaccDry | cds-NP_014407.3_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:662568-663017:+ | gene-YNR010W_VR1 | rna-NM_001183187.3_VR1 | cds-NP_014407.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:529512-529961:+ | gene-YNR010W_ZTW1 | rna-NM_001183187.3_ZTW1 | cds-NP_014407.3_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:634709-635161:+ | gene-YNR010W_Sparadoxus | rna-NM_001183187.3_Sparadoxus | cds-NP_014407.3_Sparadoxus | 88.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |