Gene name: CRN1
Reference locus (S288C): YLR429W
Gene biotype: protein_coding
Description: Coronin-like protein; Coronin; cortical actin cytoskeletal component that associates with the Arp2p/Arp3p complex to regulate its activity; plays a role in regulation of actin patch assembly
Top 10 interactors (score): COF1 (0.996); ACT1 (0.995); ARP2 (0.992); SAC6 (0.988); AIP1 (0.955); TWF1 (0.948); LAS17 (0.945); PFY1 (0.908); SLA2 (0.902); ARC35 (0.897); RAD53 (0.896); DUN1 (0.896); ARP3 (0.896); AIM7 (0.887); ABP1 (0.873); MYO1 (0.871); ARC15 (0.848); MYO5 (0.846); MYO3 (0.844); VRP1 (0.843)
Homologues (species, bitscore): CORO6 (Homo sapiens, 336.7); Coro1c (Mus musculus, 334.7); coro1cb (Danio rerio, 332.4); coro2b (Xenopus tropicalis, 300.8); coro (Drosophila melanogaster, 297.4); cor-1 (Caenorhabditis elegans, 273.1); TAF5 (Arabidopsis thaliana, 83.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:929036-930991:+ | gene-YLR429W_AKU4011 | rna-NM_001182317.1_AKU4011 | cds-NP_013533.1_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000048.1:161525-163480:+ | gene-YLR429W_BG1 | rna-NM_001182317.1_BG1 | cds-NP_013533.1_BG1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:967339-969294:+ | gene-YLR429W_Bruggeman | rna-NM_001182317.1_Bruggeman | cds-NP_013533.1_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:963361-965316:+ | gene-YLR429W_CAT1 | rna-NM_001182317.1_CAT1 | cds-NP_013533.1_CAT1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:964633-966588:+ | gene-YLR429W_CBS1585 | rna-NM_001182317.1_CBS1585 | cds-NP_013533.1_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:953974-955929:+ | gene-YLR429W_CBS436 | rna-NM_001182317.1_CBS436 | cds-NP_013533.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:1000673-1002628:+ | gene-YLR429W_CBS6412 | rna-NM_001182317.1_CBS6412 | cds-NP_013533.1_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:965415-967370:+ | gene-YLR429W_CBS6413 | rna-NM_001182317.1_CBS6413 | cds-NP_013533.1_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:975399-977354:+ | gene-YLR429W_CENPK1137D | rna-NM_001182317.1_CENPK1137D | cds-NP_013533.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:922063-924018:+ | gene-YLR429W_EthanolRed | rna-NM_001182317.1_EthanolRed | cds-NP_013533.1_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:957334-959289:+ | gene-YLR429W_FaliES1 | rna-NM_001182317.1_FaliES1 | cds-NP_013533.1_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000194.1:59397-61352:- | gene-YLR429W_JAY291 | rna-NM_001182317.1_JAY291 | cds-NP_013533.1_JAY291 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:966200-968155:+ | gene-YLR429W_MUCL30387 | rna-NM_001182317.1_MUCL30387 | cds-NP_013533.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:973558-975513:+ | gene-YLR429W_MUCL30388 | rna-NM_001182317.1_MUCL30388 | cds-NP_013533.1_MUCL30388 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:965853-967808:+ | gene-YLR429W_MUCL39482 | rna-NM_001182317.1_MUCL39482 | cds-NP_013533.1_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:966349-968304:+ | gene-YLR429W_MUCL42920 | rna-NM_001182317.1_MUCL42920 | cds-NP_013533.1_MUCL42920 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:990751-992706:+ | gene-YLR429W_NCIM3186 | rna-NM_001182317.1_NCIM3186 | cds-NP_013533.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:975032-976987:+ | gene-YLR429W_NCYC1407 | rna-NM_001182317.1_NCYC1407 | cds-NP_013533.1_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:961735-963690:+ | gene-YLR429W_PE2H3 | rna-NM_001182317.1_PE2H3 | cds-NP_013533.1_PE2H3 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:961479-963434:+ | gene-YLR429W_PE2H4 | rna-NM_001182317.1_PE2H4 | cds-NP_013533.1_PE2H4 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:990777-992732:+ | gene-YLR429W_S288C | rna-NM_001182317.1_S288C | cds-NP_013533.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000007.1:67229-69184:- | gene-YLR429W_SA1 | rna-NM_001182317.1_SA1 | cds-NP_013533.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:960413-962368:+ | gene-YLR429W_ThermosaccDry | rna-NM_001182317.1_ThermosaccDry | cds-NP_013533.1_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:966840-968795:+ | gene-YLR429W_VR1 | rna-NM_001182317.1_VR1 | cds-NP_013533.1_VR1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000025.1:290687-292642:+ | gene-YLR429W_ZTW1 | rna-NM_001182317.1_ZTW1 | cds-NP_013533.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:939839-941806:+ | gene-YLR429W_Sparadoxus | rna-NM_001182317.1_Sparadoxus | cds-NP_013533.1_Sparadoxus | 88.8 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |