Gene name: CRM1
Reference locus (S288C): YGR218W
Gene biotype: protein_coding
Description: Exportin-1; Major karyopherin; involved in export of proteins, RNAs, and ribosomal subunits from the nucleus; exportin
Top 10 interactors (score): MEX67 (0.999); GSP1 (0.999); NMD3 (0.999); GSP2 (0.999); YRB1 (0.999); SRM1 (0.999); NUP159 (0.997); YRB2 (0.997); KAP95 (0.997); KAP123 (0.997); RNA1 (0.996); NUP116 (0.995); NUP100 (0.994); LOS1 (0.993); DBP5 (0.992); ARX1 (0.989); NUP145 (0.988); YAP1 (0.988); SRP1 (0.986); CSE1 (0.986)
Homologues (species, bitscore): XPO1 (Homo sapiens, 1031.6); Xpo1 (Mus musculus, 1036.2); xpo1b (Danio rerio, 1035.0); xpo1 (Xenopus tropicalis, 1028.5); emb (Drosophila melanogaster, 909.1); xpo-1 (Caenorhabditis elegans, 854.4); XPO1B (Arabidopsis thaliana, 886.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:897845-901099:+ | gene-YGR218W_AKU4011 | rna-NM_001181347.3_AKU4011 | cds-NP_011734.3_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000021.1:178067-181321:+ | gene-YGR218W_BG1 | rna-NM_001181347.3_BG1 | cds-NP_011734.3_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:905549-908803:+ | gene-YGR218W_Bruggeman | rna-NM_001181347.3_Bruggeman | cds-NP_011734.3_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:903799-907053:+ | gene-YGR218W_CAT1 | rna-NM_001181347.3_CAT1 | cds-NP_011734.3_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:900795-904049:+ | gene-YGR218W_CBS1585 | rna-NM_001181347.3_CBS1585 | cds-NP_011734.3_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:904475-907729:+ | gene-YGR218W_CBS436 | rna-NM_001181347.3_CBS436 | cds-NP_011734.3_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:891665-894919:+ | gene-YGR218W_CBS6412 | rna-NM_001181347.3_CBS6412 | cds-NP_011734.3_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:897724-900978:+ | gene-YGR218W_CBS6413 | rna-NM_001181347.3_CBS6413 | cds-NP_011734.3_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:932123-935377:+ | gene-YGR218W_CENPK1137D | rna-NM_001181347.3_CENPK1137D | cds-NP_011734.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:886175-889429:+ | gene-YGR218W_EthanolRed | rna-NM_001181347.3_EthanolRed | cds-NP_011734.3_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:890566-893820:+ | gene-YGR218W_FaliES1 | rna-NM_001181347.3_FaliES1 | cds-NP_011734.3_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000076.1:136445-139699:- | gene-YGR218W_JAY291 | rna-NM_001181347.3_JAY291 | cds-NP_011734.3_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:903464-906718:+ | gene-YGR218W_MUCL30387 | rna-NM_001181347.3_MUCL30387 | cds-NP_011734.3_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:902720-905974:+ | gene-YGR218W_MUCL30388 | rna-NM_001181347.3_MUCL30388 | cds-NP_011734.3_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:895872-899126:+ | gene-YGR218W_MUCL39482 | rna-NM_001181347.3_MUCL39482 | cds-NP_011734.3_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:914424-917678:+ | gene-YGR218W_MUCL42920 | rna-NM_001181347.3_MUCL42920 | cds-NP_011734.3_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:932541-935795:+ | gene-YGR218W_NCIM3186 | rna-NM_001181347.3_NCIM3186 | cds-NP_011734.3_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:891524-894778:+ | gene-YGR218W_NCYC1407 | rna-NM_001181347.3_NCYC1407 | cds-NP_011734.3_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:916462-919716:+ | gene-YGR218W_PE2H3 | rna-NM_001181347.3_PE2H3 | cds-NP_011734.3_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:921572-924826:+ | gene-YGR218W_PE2H4 | rna-NM_001181347.3_PE2H4 | cds-NP_011734.3_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:932541-935795:+ | gene-YGR218W_S288C | rna-NM_001181347.3_S288C | cds-NP_011734.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000045.1:65969-69223:- | gene-YGR218W_SA1 | rna-NM_001181347.3_SA1 | cds-NP_011734.3_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:911077-914331:+ | gene-YGR218W_ThermosaccDry | rna-NM_001181347.3_ThermosaccDry | cds-NP_011734.3_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:1015890-1019144:+ | gene-YGR218W_VR1 | rna-NM_001181347.3_VR1 | cds-NP_011734.3_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000016.1:212512-215766:+ | gene-YGR218W_ZTW1 | rna-NM_001181347.3_ZTW1 | cds-NP_011734.3_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:903142-906396:+ | gene-YGR218W_Sparadoxus | rna-NM_001181347.3_Sparadoxus | cds-NP_011734.3_Sparadoxus | 92.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |