Gene name: CRH1
Reference locus (S288C): YGR189C
Gene biotype: protein_coding
Description: Probable glycosidase CRH1; Chitin transglycosylase; functions in the transfer of chitin to beta(1-6) and beta(1-3) glucans in the cell wall; similar and functionally redundant to Utr2; localizes to sites of polarized growth; expression induced by cell wall stress
Top 10 interactors (score): CIS3 (0.975); CTS1 (0.915); AMA1 (0.896); YFL040W (0.88); UTR2 (0.846); SCW10 (0.802); GAS5 (0.796); PST1 (0.77); GAS1 (0.763); CWP1 (0.748); PIR3 (0.745); SCW4 (0.735); AIM2 (0.712); CCW14 (0.712); CBF5 (0.712); PIR1 (0.711); YDL144C (0.653); DCV1 (0.616); YFR012W-A (0.616); BGL2 (0.606)
Homologues (species, bitscore): XTH16 (Arabidopsis thaliana, 79.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | MBVO01000066.1:687-2234:- | gene-YGR189C_AKU4011 | rna-NM_001181318.1_AKU4011 | cds-NP_011705.1_AKU4011 | 97.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000021.1:122529-124037:- | gene-YGR189C_BG1 | rna-NM_001181318.1_BG1 | cds-NP_011705.1_BG1 | 95.7 | 97.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:850349-851896:- | gene-YGR189C_Bruggeman | rna-NM_001181318.1_Bruggeman | cds-NP_011705.1_Bruggeman | 97.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:848196-849667:- | gene-YGR189C_CAT1 | rna-NM_001181318.1_CAT1 | cds-NP_011705.1_CAT1 | 92.9 | 96.3 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:845134-846657:- | gene-YGR189C_CBS1585 | rna-NM_001181318.1_CBS1585 | cds-NP_011705.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:849028-850503:- | gene-YGR189C_CBS436 | rna-NM_001181318.1_CBS436 | cds-NP_011705.1_CBS436 | 96.4 | 96.8 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:836505-838028:- | gene-YGR189C_CBS6412 | rna-NM_001181318.1_CBS6412 | cds-NP_011705.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:842000-843523:- | gene-YGR189C_CBS6413 | rna-NM_001181318.1_CBS6413 | cds-NP_011705.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:876395-877918:- | gene-YGR189C_CENPK1137D | rna-NM_001181318.1_CENPK1137D | cds-NP_011705.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:831010-832533:- | gene-YGR189C_EthanolRed | rna-NM_001181318.1_EthanolRed | cds-NP_011705.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:835401-836924:- | gene-YGR189C_FaliES1 | rna-NM_001181318.1_FaliES1 | cds-NP_011705.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000146.1:466-1974:- | gene-YGR189C_JAY291 | rna-NM_001181318.1_JAY291 | cds-NP_011705.1_JAY291 | 95.7 | 97.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:847839-849386:- | gene-YGR189C_MUCL30387 | rna-NM_001181318.1_MUCL30387 | cds-NP_011705.1_MUCL30387 | 97.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:847551-849074:- | gene-YGR189C_MUCL30388 | rna-NM_001181318.1_MUCL30388 | cds-NP_011705.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:840707-842230:- | gene-YGR189C_MUCL39482 | rna-NM_001181318.1_MUCL39482 | cds-NP_011705.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:858249-859772:- | gene-YGR189C_MUCL42920 | rna-NM_001181318.1_MUCL42920 | cds-NP_011705.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:876669-878192:- | gene-YGR189C_NCIM3186 | rna-NM_001181318.1_NCIM3186 | cds-NP_011705.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:835817-837340:- | gene-YGR189C_NCYC1407 | rna-NM_001181318.1_NCYC1407 | cds-NP_011705.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:855013-856521:- | gene-YGR189C_PE2H3 | rna-NM_001181318.1_PE2H3 | cds-NP_011705.1_PE2H3 | 95.7 | 97.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:860123-861631:- | gene-YGR189C_PE2H4 | rna-NM_001181318.1_PE2H4 | cds-NP_011705.1_PE2H4 | 95.7 | 97.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:876669-878192:- | gene-YGR189C_S288C | rna-NM_001181318.1_S288C | cds-NP_011705.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000035.1:100384-101892:- | gene-YGR189C_SA1 | rna-NM_001181318.1_SA1 | cds-NP_011705.1_SA1 | 95.7 | 97.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:855912-857435:- | gene-YGR189C_ThermosaccDry | rna-NM_001181318.1_ThermosaccDry | cds-NP_011705.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:960161-961669:- | gene-YGR189C_VR1 | rna-NM_001181318.1_VR1 | cds-NP_011705.1_VR1 | 95.7 | 97.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000016.1:157349-158872:- | gene-YGR189C_ZTW1 | rna-NM_001181318.1_ZTW1 | cds-NP_011705.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:846825-848309:- | gene-YGR189C_Sparadoxus | rna-NM_001181318.1_Sparadoxus | cds-NP_011705.1_Sparadoxus | 85.5 | 97.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |