Gene name: CPS1
Reference locus (S288C): YJL172W
Gene biotype: protein_coding
Description: Gly-xaa carboxypeptidase; Vacuolar carboxypeptidase S; expression is induced under low-nitrogen conditions
Top 10 interactors (score): PRC1 (0.925); RSP5 (0.893); SNA3 (0.865); PPN1 (0.85); VPS27 (0.845); PRB1 (0.806); DAP2 (0.795); PEP4 (0.787); UBI4 (0.786); ARG5,6 (0.774); BSD2 (0.758); PEP1 (0.751); DOA4 (0.749); FUR4 (0.746); VPS60 (0.745); YFR006W (0.74); ARG3 (0.725); STE3 (0.72); APE3 (0.717); IST1 (0.715)
Homologues (species, bitscore): PM20D1 (Homo sapiens, 197.2); Pm20d1 (Mus musculus, 204.1); pm20d1.2 (Danio rerio, 158.7); pm20d1 (Xenopus tropicalis, 166.8); CG6733 (Drosophila melanogaster, 70.1); C06A6.4 (Caenorhabditis elegans, 77.0); AQI (Arabidopsis thaliana, 74.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:86132-87862:+ | gene-YJL172W_AKU4011 | rna-NM_001181605.1_AKU4011 | cds-NP_012363.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000134.1:505-2235:+ | gene-YJL172W_BG1 | rna-NM_001181605.1_BG1 | cds-NP_012363.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:97963-99693:+ | gene-YJL172W_Bruggeman | rna-NM_001181605.1_Bruggeman | cds-NP_012363.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:101434-103164:+ | gene-YJL172W_CAT1 | rna-NM_001181605.1_CAT1 | cds-NP_012363.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:91767-93497:+ | gene-YJL172W_CBS1585 | rna-NM_001181605.1_CBS1585 | cds-NP_012363.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:116530-118260:+ | gene-YJL172W_CBS436 | rna-NM_001181605.1_CBS436 | cds-NP_012363.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:88249-89979:+ | gene-YJL172W_CBS6412 | rna-NM_001181605.1_CBS6412 | cds-NP_012363.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:89242-90972:+ | gene-YJL172W_CBS6413 | rna-NM_001181605.1_CBS6413 | cds-NP_012363.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:80214-81944:+ | gene-YJL172W_CENPK1137D | rna-NM_001181605.1_CENPK1137D | cds-NP_012363.1_CENPK1137D | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:90428-92158:+ | gene-YJL172W_EthanolRed | rna-NM_001181605.1_EthanolRed | cds-NP_012363.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:95705-97435:+ | gene-YJL172W_FaliES1 | rna-NM_001181605.1_FaliES1 | cds-NP_012363.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000164.1:21288-23018:- | gene-YJL172W_JAY291 | rna-NM_001181605.1_JAY291 | cds-NP_012363.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:99692-101422:+ | gene-YJL172W_MUCL30387 | rna-NM_001181605.1_MUCL30387 | cds-NP_012363.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:96254-97984:+ | gene-YJL172W_MUCL30388 | rna-NM_001181605.1_MUCL30388 | cds-NP_012363.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:90509-92239:+ | gene-YJL172W_MUCL39482 | rna-NM_001181605.1_MUCL39482 | cds-NP_012363.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:95120-96850:+ | gene-YJL172W_MUCL42920 | rna-NM_001181605.1_MUCL42920 | cds-NP_012363.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:97716-99446:+ | gene-YJL172W_NCIM3186 | rna-NM_001181605.1_NCIM3186 | cds-NP_012363.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:89120-90850:+ | gene-YJL172W_NCYC1407 | rna-NM_001181605.1_NCYC1407 | cds-NP_012363.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:101836-103566:+ | gene-YJL172W_PE2H3 | rna-NM_001181605.1_PE2H3 | cds-NP_012363.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:101475-103205:+ | gene-YJL172W_PE2H4 | rna-NM_001181605.1_PE2H4 | cds-NP_012363.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:97737-99467:+ | gene-YJL172W_S288C | rna-NM_001181605.1_S288C | cds-NP_012363.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000022.1:54067-55797:- | gene-YJL172W_SA1 | rna-NM_001181605.1_SA1 | cds-NP_012363.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:88899-90629:+ | gene-YJL172W_ThermosaccDry | rna-NM_001181605.1_ThermosaccDry | cds-NP_012363.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:95786-97516:+ | gene-YJL172W_VR1 | rna-NM_001181605.1_VR1 | cds-NP_012363.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:76483-78213:+ | gene-YJL172W_ZTW1 | rna-NM_001181605.1_ZTW1 | cds-NP_012363.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:100948-102678:+ | gene-YJL172W_Sparadoxus | rna-NM_001181605.1_Sparadoxus | cds-NP_012363.1_Sparadoxus | 92.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |