Gene name: CPR4
Reference locus (S288C): YCR069W
Gene biotype: protein_coding
Description: Peptidyl-prolyl cis-trans isomerase (cyclophilin); catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; has a potential role in the secretory pathway; CPR4 has a paralog, CPR8, that arose from the whole genome duplication
Top 10 interactors (score): FPR2 (0.859); CPR7 (0.825); VPS62 (0.714); OXR1 (0.708); ERG11 (0.706); NSP1 (0.629); KAR2 (0.599); PDI1 (0.573); NCP1 (0.571); PER1 (0.569); FPR3 (0.568); PHM6 (0.567); GUK1 (0.532); NUP2 (0.528); ERV46 (0.523); FPR4 (0.52); GSP2 (0.519); FPR1 (0.519); EUG1 (0.516); RNA1 (0.507)
Homologues (species, bitscore): PPIB (Homo sapiens, 93.6); Ppib (Mus musculus, 95.5); ppib (Danio rerio, 91.7); ppib (Xenopus tropicalis, 91.7); CG2852 (Drosophila melanogaster, 86.3); cyn-3 (Caenorhabditis elegans, 96.7); SQN (Arabidopsis thaliana, 103.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:233569-234525:+ | gene-YCR069W_AKU4011 | rna-NM_001178780.1_AKU4011 | cds-NP_009995.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000067.1:92244-93200:+ | gene-YCR069W_BG1 | rna-NM_001178780.1_BG1 | cds-NP_009995.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005505.1:229780-230736:+ | gene-YCR069W_Bruggeman | rna-NM_001178780.1_Bruggeman | cds-NP_009995.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:240849-241805:+ | gene-YCR069W_CAT1 | rna-NM_001178780.1_CAT1 | cds-NP_009995.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005361.1:228348-229304:+ | gene-YCR069W_CBS1585 | rna-NM_001178780.1_CBS1585 | cds-NP_009995.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:240185-241141:+ | gene-YCR069W_CBS436 | rna-NM_001178780.1_CBS436 | cds-NP_009995.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005329.1:220088-221044:+ | gene-YCR069W_CBS6412 | rna-NM_001178780.1_CBS6412 | cds-NP_009995.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:234436-235392:+ | gene-YCR069W_CBS6413 | rna-NM_001178780.1_CBS6413 | cds-NP_009995.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001524.1:238302-239258:+ | gene-YCR069W_CENPK1137D | rna-NM_001178780.1_CENPK1137D | cds-NP_009995.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:229541-230497:+ | gene-YCR069W_EthanolRed | rna-NM_001178780.1_EthanolRed | cds-NP_009995.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:234703-235659:+ | gene-YCR069W_FaliES1 | rna-NM_001178780.1_FaliES1 | cds-NP_009995.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000323.1:53064-54020:- | gene-YCR069W_JAY291 | rna-NM_001178780.1_JAY291 | cds-NP_009995.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:226505-227461:+ | gene-YCR069W_MUCL30387 | rna-NM_001178780.1_MUCL30387 | cds-NP_009995.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005441.1:226776-227732:+ | gene-YCR069W_MUCL30388 | rna-NM_001178780.1_MUCL30388 | cds-NP_009995.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:234921-235877:+ | gene-YCR069W_MUCL39482 | rna-NM_001178780.1_MUCL39482 | cds-NP_009995.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005425.1:231356-232312:+ | gene-YCR069W_MUCL42920 | rna-NM_001178780.1_MUCL42920 | cds-NP_009995.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:238687-239643:+ | gene-YCR069W_NCIM3186 | rna-NM_001178780.1_NCIM3186 | cds-NP_009995.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005265.1:235780-236736:+ | gene-YCR069W_NCYC1407 | rna-NM_001178780.1_NCYC1407 | cds-NP_009995.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:250366-251322:+ | gene-YCR069W_PE2H3 | rna-NM_001178780.1_PE2H3 | cds-NP_009995.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:238918-239874:+ | gene-YCR069W_PE2H4 | rna-NM_001178780.1_PE2H4 | cds-NP_009995.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:239055-240011:+ | gene-YCR069W_S288C | rna-NM_001178780.1_S288C | cds-NP_009995.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000044.1:38935-39891:+ | gene-YCR069W_SA1 | rna-NM_001178780.1_SA1 | cds-NP_009995.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:234630-235586:+ | gene-YCR069W_ThermosaccDry | rna-NM_001178780.1_ThermosaccDry | cds-NP_009995.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:245903-246859:+ | gene-YCR069W_VR1 | rna-NM_001178780.1_VR1 | cds-NP_009995.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:232503-233459:+ | gene-YCR069W_ZTW1 | rna-NM_001178780.1_ZTW1 | cds-NP_009995.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:266692-267651:+ | gene-YCR069W_Sparadoxus | rna-NM_001178780.1_Sparadoxus | cds-NP_009995.1_Sparadoxus | 87.5 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |