Gene name: CPR3
Reference locus (S288C): YML078W
Gene biotype: protein_coding
Description: Mitochondrial peptidyl-prolyl cis-trans isomerase (cyclophilin); catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; involved in protein refolding after import into mitochondria
Top 10 interactors (score): NSP1 (0.969); FPR1 (0.967); SEC4 (0.963); NUP2 (0.934); UBC9 (0.863); RNA1 (0.85); NUP159 (0.774); SMT3 (0.755); AIF1 (0.754); DUF1 (0.744); FPR2 (0.736); YNK1 (0.729); GSP1 (0.697); GSP2 (0.697); COF1 (0.697); FPR3 (0.692); RUB1 (0.684); PUF3 (0.672); HSC82 (0.664); HSP82 (0.656)
Homologues (species, bitscore): PPIF (Homo sapiens, 215.7); Ppif (Mus musculus, 213.4); ppiaa (Danio rerio, 216.1); ppia (Xenopus tropicalis, 214.5); CG7768 (Drosophila melanogaster, 219.9); cyn-3 (Caenorhabditis elegans, 211.1); ROC5 (Arabidopsis thaliana, 213.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:104735-105283:+ | gene-YML078W_AKU4011 | rna-NM_001182437.1_AKU4011 | cds-NP_013633.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:370830-371378:- | gene-YML078W_BG1 | rna-NM_001182437.1_BG1 | cds-NP_013633.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:110903-111451:+ | gene-YML078W_Bruggeman | rna-NM_001182437.1_Bruggeman | cds-NP_013633.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:112577-113125:+ | gene-YML078W_CAT1 | rna-NM_001182437.1_CAT1 | cds-NP_013633.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:104744-105292:+ | gene-YML078W_CBS1585 | rna-NM_001182437.1_CBS1585 | cds-NP_013633.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:110671-111219:+ | gene-YML078W_CBS436 | rna-NM_001182437.1_CBS436 | cds-NP_013633.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:105452-106000:+ | gene-YML078W_CBS6412 | rna-NM_001182437.1_CBS6412 | cds-NP_013633.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:103927-104475:+ | gene-YML078W_CBS6413 | rna-NM_001182437.1_CBS6413 | cds-NP_013633.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:105721-106269:+ | gene-YML078W_CENPK1137D | rna-NM_001182437.1_CENPK1137D | cds-NP_013633.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:105010-105558:+ | gene-YML078W_EthanolRed | rna-NM_001182437.1_EthanolRed | cds-NP_013633.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:105519-106067:+ | gene-YML078W_FaliES1 | rna-NM_001182437.1_FaliES1 | cds-NP_013633.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000366.1:51021-51569:- | gene-YML078W_JAY291 | rna-NM_001182437.1_JAY291 | cds-NP_013633.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:109427-109975:+ | gene-YML078W_MUCL30387 | rna-NM_001182437.1_MUCL30387 | cds-NP_013633.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:112573-113121:+ | gene-YML078W_MUCL30388 | rna-NM_001182437.1_MUCL30388 | cds-NP_013633.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:104755-105303:+ | gene-YML078W_MUCL39482 | rna-NM_001182437.1_MUCL39482 | cds-NP_013633.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:109482-110030:+ | gene-YML078W_MUCL42920 | rna-NM_001182437.1_MUCL42920 | cds-NP_013633.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:110956-111504:+ | gene-YML078W_NCIM3186 | rna-NM_001182437.1_NCIM3186 | cds-NP_013633.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:105550-106098:+ | gene-YML078W_NCYC1407 | rna-NM_001182437.1_NCYC1407 | cds-NP_013633.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:110907-111455:+ | gene-YML078W_PE2H3 | rna-NM_001182437.1_PE2H3 | cds-NP_013633.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:110848-111396:+ | gene-YML078W_PE2H4 | rna-NM_001182437.1_PE2H4 | cds-NP_013633.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:111002-111550:+ | gene-YML078W_S288C | rna-NM_001182437.1_S288C | cds-NP_013633.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000041.1:72688-73236:- | gene-YML078W_SA1 | rna-NM_001182437.1_SA1 | cds-NP_013633.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:104811-105359:+ | gene-YML078W_ThermosaccDry | rna-NM_001182437.1_ThermosaccDry | cds-NP_013633.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:109196-109744:+ | gene-YML078W_VR1 | rna-NM_001182437.1_VR1 | cds-NP_013633.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:84345-84893:+ | gene-YML078W_ZTW1 | rna-NM_001182437.1_ZTW1 | cds-NP_013633.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:115533-116081:+ | gene-YML078W_Sparadoxus | rna-NM_001182437.1_Sparadoxus | cds-NP_013633.1_Sparadoxus | 91.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |