Gene name: COX6
Reference locus (S288C): YHR051W
Gene biotype: protein_coding
Description: Subunit VI of cytochrome c oxidase (Complex IV); Complex IV is the terminal member of the mitochondrial inner membrane electron transport chain; expression is regulated by oxygen levels
Top 10 interactors (score): COX2 (0.999); QCR7 (0.999); COX12 (0.999); COX9 (0.999); QCR2 (0.999); QCR9 (0.999); COX13 (0.999); COX5A (0.999); QCR8 (0.999); CYT1 (0.999); ATP20 (0.999); COX3 (0.999); RIP1 (0.999); COR1 (0.999); COX8 (0.999); COX4 (0.999); COX1 (0.999); COX5B (0.999); QCR6 (0.999); ATP4 (0.998)
Homologues (species, bitscore): COX5A (Homo sapiens, 79.7); Cox5a (Mus musculus, 74.3); cox5ab (Danio rerio, 82.4); cox5a (Xenopus tropicalis, 80.1); COX5A (Drosophila melanogaster, 85.1); cco-2 (Caenorhabditis elegans, 65.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:197967-198413:+ | gene-YHR051W_AKU4011 | rna-NM_001179181.1_AKU4011 | cds-NP_011918.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000053.1:118223-118669:+ | gene-YHR051W_BG1 | rna-NM_001179181.1_BG1 | cds-NP_011918.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:205720-206166:+ | gene-YHR051W_Bruggeman | rna-NM_001179181.1_Bruggeman | cds-NP_011918.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:200514-200960:+ | gene-YHR051W_CAT1 | rna-NM_001179181.1_CAT1 | cds-NP_011918.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:197073-197519:+ | gene-YHR051W_CBS1585 | rna-NM_001179181.1_CBS1585 | cds-NP_011918.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:192581-193027:+ | gene-YHR051W_CBS436 | rna-NM_001179181.1_CBS436 | cds-NP_011918.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:197305-197751:+ | gene-YHR051W_CBS6412 | rna-NM_001179181.1_CBS6412 | cds-NP_011918.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:198138-198584:+ | gene-YHR051W_CBS6413 | rna-NM_001179181.1_CBS6413 | cds-NP_011918.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:202966-203412:+ | gene-YHR051W_CENPK1137D | rna-NM_001179181.1_CENPK1137D | cds-NP_011918.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:197465-197911:+ | gene-YHR051W_EthanolRed | rna-NM_001179181.1_EthanolRed | cds-NP_011918.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:198442-198888:+ | gene-YHR051W_FaliES1 | rna-NM_001179181.1_FaliES1 | cds-NP_011918.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000244.1:15194-15640:+ | gene-YHR051W_JAY291 | rna-NM_001179181.1_JAY291 | cds-NP_011918.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:205179-205625:+ | gene-YHR051W_MUCL30387 | rna-NM_001179181.1_MUCL30387 | cds-NP_011918.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:205354-205800:+ | gene-YHR051W_MUCL30388 | rna-NM_001179181.1_MUCL30388 | cds-NP_011918.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:197358-197804:+ | gene-YHR051W_MUCL39482 | rna-NM_001179181.1_MUCL39482 | cds-NP_011918.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:204263-204709:+ | gene-YHR051W_MUCL42920 | rna-NM_001179181.1_MUCL42920 | cds-NP_011918.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:209587-210033:+ | gene-YHR051W_NCIM3186 | rna-NM_001179181.1_NCIM3186 | cds-NP_011918.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:197373-197819:+ | gene-YHR051W_NCYC1407 | rna-NM_001179181.1_NCYC1407 | cds-NP_011918.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:199561-200007:+ | gene-YHR051W_PE2H3 | rna-NM_001179181.1_PE2H3 | cds-NP_011918.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:207008-207454:+ | gene-YHR051W_PE2H4 | rna-NM_001179181.1_PE2H4 | cds-NP_011918.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:209705-210151:+ | gene-YHR051W_S288C | rna-NM_001179181.1_S288C | cds-NP_011918.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000014.1:148443-148889:- | gene-YHR051W_SA1 | rna-NM_001179181.1_SA1 | cds-NP_011918.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:199533-199979:+ | gene-YHR051W_ThermosaccDry | rna-NM_001179181.1_ThermosaccDry | cds-NP_011918.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:206065-206511:+ | gene-YHR051W_VR1 | rna-NM_001179181.1_VR1 | cds-NP_011918.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:191078-191524:+ | gene-YHR051W_ZTW1 | rna-NM_001179181.1_ZTW1 | cds-NP_011918.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:196650-197096:+ | gene-YHR051W_Sparadoxus | rna-NM_001179181.1_Sparadoxus | cds-NP_011918.1_Sparadoxus | 93.0 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |