Gene name: COX5A
Reference locus (S288C): YNL052W
Gene biotype: protein_coding
Description: Subunit Va of cytochrome c oxidase; cytochrome c oxidase is the terminal member of the mitochondrial inner membrane electron transport chain; Cox5Ap is predominantly expressed during aerobic growth while its isoform Vb (Cox5Bp) is expressed during anaerobic growth; COX5A has a paralog, COX5B, that arose from the whole genome duplication
Top 10 interactors (score): QCR6 (0.999); QCR2 (0.999); CYT1 (0.999); QCR8 (0.999); QCR9 (0.999); COX13 (0.999); COX2 (0.999); QCR7 (0.999); COX9 (0.999); COX12 (0.999); COX6 (0.999); RIP1 (0.999); COX4 (0.999); COX8 (0.999); COR1 (0.999); COX7 (0.998); COX1 (0.998); COX3 (0.997); QCR10 (0.997); ATP16 (0.992)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:519525-519986:+ | gene-YNL052W_AKU4011 | rna-NM_001182891.1_AKU4011 | cds-NP_014346.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:423485-423946:+ | gene-YNL052W_BG1 | rna-NM_001182891.1_BG1 | cds-NP_014346.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:536636-537097:+ | gene-YNL052W_Bruggeman | rna-NM_001182891.1_Bruggeman | cds-NP_014346.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:573197-573658:+ | gene-YNL052W_CAT1 | rna-NM_001182891.1_CAT1 | cds-NP_014346.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:520195-520656:+ | gene-YNL052W_CBS1585 | rna-NM_001182891.1_CBS1585 | cds-NP_014346.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:588445-588906:+ | gene-YNL052W_CBS436 | rna-NM_001182891.1_CBS436 | cds-NP_014346.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:515288-515749:+ | gene-YNL052W_CBS6412 | rna-NM_001182891.1_CBS6412 | cds-NP_014346.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:516606-517067:+ | gene-YNL052W_CBS6413 | rna-NM_001182891.1_CBS6413 | cds-NP_014346.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:525311-525772:+ | gene-YNL052W_CENPK1137D | rna-NM_001182891.1_CENPK1137D | cds-NP_014346.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:522347-522808:+ | gene-YNL052W_EthanolRed | rna-NM_001182891.1_EthanolRed | cds-NP_014346.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:512872-513333:+ | gene-YNL052W_FaliES1 | rna-NM_001182891.1_FaliES1 | cds-NP_014346.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000040.1:27916-28377:+ | gene-YNL052W_JAY291 | rna-NM_001182891.1_JAY291 | cds-NP_014346.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:532970-533431:+ | gene-YNL052W_MUCL30387 | rna-NM_001182891.1_MUCL30387 | cds-NP_014346.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:562390-562851:+ | gene-YNL052W_MUCL30388 | rna-NM_001182891.1_MUCL30388 | cds-NP_014346.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:517611-518072:+ | gene-YNL052W_MUCL39482 | rna-NM_001182891.1_MUCL39482 | cds-NP_014346.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:521683-522144:+ | gene-YNL052W_MUCL42920 | rna-NM_001182891.1_MUCL42920 | cds-NP_014346.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:531694-532155:+ | gene-YNL052W_NCIM3186 | rna-NM_001182891.1_NCIM3186 | cds-NP_014346.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:519663-520124:+ | gene-YNL052W_NCYC1407 | rna-NM_001182891.1_NCYC1407 | cds-NP_014346.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:522832-523293:+ | gene-YNL052W_PE2H3 | rna-NM_001182891.1_PE2H3 | cds-NP_014346.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:517907-518368:+ | gene-YNL052W_PE2H4 | rna-NM_001182891.1_PE2H4 | cds-NP_014346.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:531725-532186:+ | gene-YNL052W_S288C | rna-NM_001182891.1_S288C | cds-NP_014346.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000024.1:110756-111217:+ | gene-YNL052W_SA1 | rna-NM_001182891.1_SA1 | cds-NP_014346.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:513747-514208:+ | gene-YNL052W_ThermosaccDry | rna-NM_001182891.1_ThermosaccDry | cds-NP_014346.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:532793-533254:+ | gene-YNL052W_VR1 | rna-NM_001182891.1_VR1 | cds-NP_014346.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:423067-423528:+ | gene-YNL052W_ZTW1 | rna-NM_001182891.1_ZTW1 | cds-NP_014346.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:529032-529493:+ | gene-YNL052W_Sparadoxus | rna-NM_001182891.1_Sparadoxus | cds-NP_014346.1_Sparadoxus | 92.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |