Gene name: COX20
Reference locus (S288C): YDR231C
Gene biotype: protein_coding
Description: Mitochondrial inner membrane protein; required for proteolytic processing of Cox2p and its assembly into cytochrome c oxidase; Belongs to the COX20 family
Top 10 interactors (score): COX18 (0.989); SOM1 (0.971); BI4 (0.959); COB (0.956); OXA1 (0.955); COX2 (0.952); SCO2 (0.945); QCR7 (0.941); CYT1 (0.94); SCO1 (0.938); COX15 (0.936); QCR6 (0.934); NDI1 (0.929); QCR2 (0.919); QCR8 (0.918); COR1 (0.914); RIP1 (0.914); QCR9 (0.908); COX10 (0.907); SHY1 (0.901)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:882999-883616:- | gene-YDR231C_AKU4011 | rna-NM_001180539.1_AKU4011 | cds-NP_010517.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:242215-242832:+ | gene-YDR231C_BG1 | rna-NM_001180539.1_BG1 | cds-NP_010517.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:915306-915923:- | gene-YDR231C_Bruggeman | rna-NM_001180539.1_Bruggeman | cds-NP_010517.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:902589-903206:- | gene-YDR231C_CAT1 | rna-NM_001180539.1_CAT1 | cds-NP_010517.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:873350-873967:- | gene-YDR231C_CBS1585 | rna-NM_001180539.1_CBS1585 | cds-NP_010517.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:902353-902970:- | gene-YDR231C_CBS436 | rna-NM_001180539.1_CBS436 | cds-NP_010517.1_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:870108-870725:- | gene-YDR231C_CBS6412 | rna-NM_001180539.1_CBS6412 | cds-NP_010517.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:900710-901327:- | gene-YDR231C_CBS6413 | rna-NM_001180539.1_CBS6413 | cds-NP_010517.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:925091-925708:- | gene-YDR231C_CENPK1137D | rna-NM_001180539.1_CENPK1137D | cds-NP_010517.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:883682-884299:- | gene-YDR231C_EthanolRed | rna-NM_001180539.1_EthanolRed | cds-NP_010517.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:891884-892501:- | gene-YDR231C_FaliES1 | rna-NM_001180539.1_FaliES1 | cds-NP_010517.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000348.1:19066-19683:+ | gene-YDR231C_JAY291 | rna-NM_001180539.1_JAY291 | cds-NP_010517.1_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:900955-901572:- | gene-YDR231C_MUCL30387 | rna-NM_001180539.1_MUCL30387 | cds-NP_010517.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:889209-889826:- | gene-YDR231C_MUCL30388 | rna-NM_001180539.1_MUCL30388 | cds-NP_010517.1_MUCL30388 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:874753-875370:- | gene-YDR231C_MUCL39482 | rna-NM_001180539.1_MUCL39482 | cds-NP_010517.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:814010-814627:- | gene-YDR231C_MUCL42920 | rna-NM_001180539.1_MUCL42920 | cds-NP_010517.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:926216-926833:- | gene-YDR231C_NCIM3186 | rna-NM_001180539.1_NCIM3186 | cds-NP_010517.1_NCIM3186 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:878423-879040:- | gene-YDR231C_NCYC1407 | rna-NM_001180539.1_NCYC1407 | cds-NP_010517.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:894649-895266:- | gene-YDR231C_PE2H3 | rna-NM_001180539.1_PE2H3 | cds-NP_010517.1_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:899926-900543:- | gene-YDR231C_PE2H4 | rna-NM_001180539.1_PE2H4 | cds-NP_010517.1_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:926293-926910:- | gene-YDR231C_S288C | rna-NM_001180539.1_S288C | cds-NP_010517.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000013.1:132480-133097:- | gene-YDR231C_SA1 | rna-NM_001180539.1_SA1 | cds-NP_010517.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:890038-890655:- | gene-YDR231C_ThermosaccDry | rna-NM_001180539.1_ThermosaccDry | cds-NP_010517.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:905249-905866:- | gene-YDR231C_VR1 | rna-NM_001180539.1_VR1 | cds-NP_010517.1_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000007.1:152751-153368:- | gene-YDR231C_ZTW1 | rna-NM_001180539.1_ZTW1 | cds-NP_010517.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:894911-895528:- | gene-YDR231C_Sparadoxus | rna-NM_001180539.1_Sparadoxus | cds-NP_010517.1_Sparadoxus | 91.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |