Gene name: COX17
Reference locus (S288C): YLL009C
Gene biotype: protein_coding
Description: Copper metallochaperone that transfers copper to Sco1p and Cox11p; eventual delivery to cytochrome c oxidase; contains twin cysteine-x9-cysteine motifs; interacts with the MICOS complex, and interaction is promoted by copper ions; human homolog COX17 partially complements yeast null mutant
Top 10 interactors (score): COX19 (0.999); MIA40 (0.999); ATX1 (0.998); PUF3 (0.997); ERV1 (0.996); SCO1 (0.995); COX11 (0.995); TIM9 (0.995); TIM10 (0.993); TIM13 (0.991); MDM35 (0.99); TIM8 (0.989); SCO2 (0.985); SOD1 (0.977); PET191 (0.975); MIX17 (0.975); COX15 (0.97); CCS1 (0.968); COA4 (0.966); COX23 (0.964)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:118958-119167:- | gene-YLL009C_AKU4011 | rna-NM_001181829.1_AKU4011 | cds-NP_013092.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000212.1:82408-82617:- | gene-YLL009C_BG1 | rna-NM_001181829.1_BG1 | cds-NP_013092.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:129075-129284:- | gene-YLL009C_Bruggeman | rna-NM_001181829.1_Bruggeman | cds-NP_013092.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:129871-130080:- | gene-YLL009C_CAT1 | rna-NM_001181829.1_CAT1 | cds-NP_013092.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:126557-126766:- | gene-YLL009C_CBS1585 | rna-NM_001181829.1_CBS1585 | cds-NP_013092.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:116923-117132:- | gene-YLL009C_CBS436 | rna-NM_001181829.1_CBS436 | cds-NP_013092.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:125326-125535:- | gene-YLL009C_CBS6412 | rna-NM_001181829.1_CBS6412 | cds-NP_013092.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:126818-127027:- | gene-YLL009C_CBS6413 | rna-NM_001181829.1_CBS6413 | cds-NP_013092.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:116279-116488:- | gene-YLL009C_CENPK1137D | rna-NM_001181829.1_CENPK1137D | cds-NP_013092.1_CENPK1137D | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:118979-119188:- | gene-YLL009C_EthanolRed | rna-NM_001181829.1_EthanolRed | cds-NP_013092.1_EthanolRed | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:118550-118759:- | gene-YLL009C_FaliES1 | rna-NM_001181829.1_FaliES1 | cds-NP_013092.1_FaliES1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000083.1:36605-36814:+ | gene-YLL009C_JAY291 | rna-NM_001181829.1_JAY291 | cds-NP_013092.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:126674-126883:- | gene-YLL009C_MUCL30387 | rna-NM_001181829.1_MUCL30387 | cds-NP_013092.1_MUCL30387 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:131169-131378:- | gene-YLL009C_MUCL30388 | rna-NM_001181829.1_MUCL30388 | cds-NP_013092.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:127025-127234:- | gene-YLL009C_MUCL39482 | rna-NM_001181829.1_MUCL39482 | cds-NP_013092.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:126696-126905:- | gene-YLL009C_MUCL42920 | rna-NM_001181829.1_MUCL42920 | cds-NP_013092.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:131179-131388:- | gene-YLL009C_NCIM3186 | rna-NM_001181829.1_NCIM3186 | cds-NP_013092.1_NCIM3186 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:118631-118840:- | gene-YLL009C_NCYC1407 | rna-NM_001181829.1_NCYC1407 | cds-NP_013092.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:124995-125204:- | gene-YLL009C_PE2H3 | rna-NM_001181829.1_PE2H3 | cds-NP_013092.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:124736-124945:- | gene-YLL009C_PE2H4 | rna-NM_001181829.1_PE2H4 | cds-NP_013092.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:131205-131414:- | gene-YLL009C_S288C | rna-NM_001181829.1_S288C | cds-NP_013092.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000062.1:34180-34389:- | gene-YLL009C_SA1 | rna-NM_001181829.1_SA1 | cds-NP_013092.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:119053-119262:- | gene-YLL009C_ThermosaccDry | rna-NM_001181829.1_ThermosaccDry | cds-NP_013092.1_ThermosaccDry | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:132670-132879:- | gene-YLL009C_VR1 | rna-NM_001181829.1_VR1 | cds-NP_013092.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000023.1:118387-118596:- | gene-YLL009C_ZTW1 | rna-NM_001181829.1_ZTW1 | cds-NP_013092.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:126765-126974:- | gene-YLL009C_Sparadoxus | rna-NM_001181829.1_Sparadoxus | cds-NP_013092.1_Sparadoxus | 91.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |