Gene name: COX13
Reference locus (S288C): YGL191W
Gene biotype: protein_coding
Description: Subunit VIa of cytochrome c oxidase; present in a subclass of cytochrome c oxidase complexes that may have a role in mimimizing generation of reactive oxygen species; not essential for cytochrome c oxidase activity but may modulate activity in response to ATP; required for assembly of Rcf2p into cytochrome c oxidase - cytochrome bc1 supercomplexes
Top 10 interactors (score): QCR2 (0.999); QCR9 (0.999); COX5A (0.999); QCR8 (0.999); CYT1 (0.999); COX7 (0.999); QCR7 (0.999); COX2 (0.999); COX12 (0.999); COX6 (0.999); QCR6 (0.999); ATP20 (0.999); RIP1 (0.999); COX3 (0.999); COR1 (0.999); COX8 (0.999); COX4 (0.999); COX5B (0.999); COX1 (0.998); ATP16 (0.998)
Homologues (species, bitscore): COX6A1 (Homo sapiens, 60.1); Cox6a2 (Mus musculus, 60.8); cox6a1 (Danio rerio, 58.9); cox6a1 (Xenopus tropicalis, 52.0); levy (Drosophila melanogaster, 55.1); tag-174 (Caenorhabditis elegans, 57.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:147344-147733:+ | gene-YGL191W_AKU4011 | rna-NM_001181056.1_AKU4011 | cds-NP_011324.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000132.1:262705-263094:- | gene-YGL191W_BG1 | rna-NM_001181056.1_BG1 | cds-NP_011324.1_BG1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:149585-149974:+ | gene-YGL191W_Bruggeman | rna-NM_001181056.1_Bruggeman | cds-NP_011324.1_Bruggeman | 98.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:145448-145837:+ | gene-YGL191W_CAT1 | rna-NM_001181056.1_CAT1 | cds-NP_011324.1_CAT1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:150483-150872:+ | gene-YGL191W_CBS1585 | rna-NM_001181056.1_CBS1585 | cds-NP_011324.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:145466-145855:+ | gene-YGL191W_CBS436 | rna-NM_001181056.1_CBS436 | cds-NP_011324.1_CBS436 | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:137261-137650:+ | gene-YGL191W_CBS6412 | rna-NM_001181056.1_CBS6412 | cds-NP_011324.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:144795-145184:+ | gene-YGL191W_CBS6413 | rna-NM_001181056.1_CBS6413 | cds-NP_011324.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:145007-145396:+ | gene-YGL191W_CENPK1137D | rna-NM_001181056.1_CENPK1137D | cds-NP_011324.1_CENPK1137D | 98.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:137327-137716:+ | gene-YGL191W_EthanolRed | rna-NM_001181056.1_EthanolRed | cds-NP_011324.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:138327-138716:+ | gene-YGL191W_FaliES1 | rna-NM_001181056.1_FaliES1 | cds-NP_011324.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000397.1:63657-64046:+ | gene-YGL191W_JAY291 | rna-NM_001181056.1_JAY291 | cds-NP_011324.1_JAY291 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:146822-147211:+ | gene-YGL191W_MUCL30387 | rna-NM_001181056.1_MUCL30387 | cds-NP_011324.1_MUCL30387 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:149922-150311:+ | gene-YGL191W_MUCL30388 | rna-NM_001181056.1_MUCL30388 | cds-NP_011324.1_MUCL30388 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:147493-147882:+ | gene-YGL191W_MUCL39482 | rna-NM_001181056.1_MUCL39482 | cds-NP_011324.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:150129-150518:+ | gene-YGL191W_MUCL42920 | rna-NM_001181056.1_MUCL42920 | cds-NP_011324.1_MUCL42920 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:144808-145197:+ | gene-YGL191W_NCIM3186 | rna-NM_001181056.1_NCIM3186 | cds-NP_011324.1_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:138974-139363:+ | gene-YGL191W_NCYC1407 | rna-NM_001181056.1_NCYC1407 | cds-NP_011324.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:140969-141358:+ | gene-YGL191W_PE2H3 | rna-NM_001181056.1_PE2H3 | cds-NP_011324.1_PE2H3 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:140517-140906:+ | gene-YGL191W_PE2H4 | rna-NM_001181056.1_PE2H4 | cds-NP_011324.1_PE2H4 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:144808-145197:+ | gene-YGL191W_S288C | rna-NM_001181056.1_S288C | cds-NP_011324.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000067.1:4570-4959:+ | gene-YGL191W_SA1 | rna-NM_001181056.1_SA1 | cds-NP_011324.1_SA1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:138589-138978:+ | gene-YGL191W_ThermosaccDry | rna-NM_001181056.1_ThermosaccDry | cds-NP_011324.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:145873-146262:+ | gene-YGL191W_VR1 | rna-NM_001181056.1_VR1 | cds-NP_011324.1_VR1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:137125-137514:+ | gene-YGL191W_ZTW1 | rna-NM_001181056.1_ZTW1 | cds-NP_011324.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:144020-144409:+ | gene-YGL191W_Sparadoxus | rna-NM_001181056.1_Sparadoxus | cds-NP_011324.1_Sparadoxus | 90.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |