Gene name: COX1
Reference locus (S288C): Q0045
Gene biotype: protein_coding
Description: Subunit I of cytochrome c oxidase (Complex IV); Complex IV is the terminal member of the mitochondrial inner membrane electron transport chain; one of three mitochondrially-encoded subunits
Top 10 interactors (score): ATP6 (0.999); COX12 (0.999); COX2 (0.999); COB (0.999); COX6 (0.999); COX4 (0.999); COX8 (0.999); COX3 (0.999); COR1 (0.998); COX7 (0.998); COX5A (0.998); COX13 (0.998); COX9 (0.996); CYT1 (0.996); QCR2 (0.996); COX5B (0.996); MSS51 (0.995); RIP1 (0.995); BI4 (0.993); QCR8 (0.993)
Homologues (species, bitscore): MT-CO1 (Homo sapiens, 620.2); mt-Co1 (Mus musculus, 630.2); COX1 (Danio rerio, 633.3); COX1 (Xenopus tropicalis, 628.2); mt:CoI (Drosophila melanogaster, 629.8); COX1 (Caenorhabditis elegans, 561.6); COX1 (Arabidopsis thaliana, 700.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | MBVO01000055.1:13277-17259:+ | gene-Q0045_AKU4011 | rna-Q0045_AKU4011 | cds-NP_009305.1_AKU4011 | 66.1 | 66.7 | Unannotated | 1 | 1 | 0 | Unknown | False | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | MBVY01000033.1:14328-23289:+ | gene-Q0045_Bruggeman | rna-Q0045_Bruggeman | cds-NP_009305.1_Bruggeman | 98.8 | 99.8 | Unannotated | 1 | 1 | 0 | Unknown | False | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | MBWC01000376.1:7819-15002:+ | gene-Q0045_CAT1 | rna-Q0045_CAT1 | cds-NP_009305.1_CAT1 | 43.9 | 44.1 | Unannotated | 1 | 1 | 0 | Unknown | False | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | MBVS01000067.1:11521-19048:+ | gene-Q0045_CBS1585 | rna-Q0045_CBS1585 | cds-NP_009305.1_CBS1585 | 96.6 | 97.7 | Unannotated | 1 | 1 | 0 | Unknown | False | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | MBVR01000053.1:13613-24963:+ | gene-Q0045_CBS436 | rna-Q0045_CBS436 | cds-NP_009305.1_CBS436 | 98.5 | 100.0 | Unannotated | 1 | 1 | 0 | Unknown | False | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | MBVQ01000062.1:7219-14447:+ | gene-Q0045_CBS6412 | rna-Q0045_CBS6412 | cds-NP_009305.1_CBS6412 | 96.6 | 97.7 | Unannotated | 1 | 1 | 0 | Unknown | False | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | MBVP01000101.1:38864-50310:+ | gene-Q0045_CBS6413 | rna-Q0045_CBS6413 | cds-NP_009305.1_CBS6413 | 98.3 | 100.0 | Unannotated | 1 | 1 | 0 | Unknown | False | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | MBWB01000074.1:7651-13368:+ | gene-Q0045_EthanolRed | rna-Q0045_EthanolRed | cds-NP_009305.1_EthanolRed | 78.1 | 79.4 | Unannotated | 1 | 1 | 0 | Unknown | False | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | MBWD01000016.1:13890-19607:+ | gene-Q0045_FaliES1 | rna-Q0045_FaliES1 | cds-NP_009305.1_FaliES1 | 78.1 | 79.4 | Unannotated | 1 | 1 | 0 | Unknown | False | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000029.1:1188-7141:- | gene-Q0045_JAY291 | rna-Q0045_JAY291 | cds-NP_009305.1_JAY291 | 55.2 | 57.1 | Unannotated | 1 | 1 | 0 | Unknown | False | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | MBVX01000168.1:11838-20836:+ | gene-Q0045_MUCL30387 | rna-Q0045_MUCL30387 | cds-NP_009305.1_MUCL30387 | 98.8 | 99.8 | Unannotated | 1 | 1 | 0 | Unknown | False | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | MBVW01000208.1:13918-22873:+ | gene-Q0045_MUCL30388 | rna-Q0045_MUCL30388 | cds-NP_009305.1_MUCL30388 | 98.8 | 99.8 | Unannotated | 1 | 1 | 0 | Unknown | False | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | MBVN01000090.1:5742-12826:+ | gene-Q0045_MUCL39482 | rna-Q0045_MUCL39482 | cds-NP_009305.1_MUCL39482 | 96.6 | 97.7 | Unannotated | 1 | 1 | 0 | Unknown | False | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | MBVV01000309.1:12713-21674:+ | gene-Q0045_MUCL42920 | rna-Q0045_MUCL42920 | cds-NP_009305.1_MUCL42920 | 98.8 | 99.8 | Unannotated | 1 | 1 | 0 | Unknown | False | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011826.1:13818-26701:+ | gene-Q0045_NCIM3186 | rna-Q0045_NCIM3186 | cds-NP_009305.1_NCIM3186 | 90.9 | 91.5 | Unannotated | 1 | 1 | 0 | Unknown | False | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | MBVM01000021.1:12259-23704:+ | gene-Q0045_NCYC1407 | rna-Q0045_NCYC1407 | cds-NP_009305.1_NCYC1407 | 98.3 | 100.0 | Unannotated | 1 | 1 | 0 | Unknown | False | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994156.1:11349-21552:+ | gene-Q0045_PE2H3 | rna-Q0045_PE2H3 | cds-NP_009305.1_PE2H3 | 93.7 | 96.6 | Unannotated | 1 | 1 | 0 | Unknown | False | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999888.1:11349-21552:+ | gene-Q0045_PE2H4 | rna-Q0045_PE2H4 | cds-NP_009305.1_PE2H4 | 93.7 | 96.6 | Unannotated | 1 | 1 | 0 | Unknown | False | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001224.1:13818-26701:+ | gene-Q0045_S288C | rna-Q0045_S288C | cds-NP_009305.1_S288C | 100.0 | 100.0 | Unannotated | 1 | 1 | 0 | Unknown | False | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000049.1:2207-17076:- | gene-Q0045_SA1 | rna-Q0045_SA1 | cds-NP_009305.1_SA1 | 95.2 | 98.3 | Unannotated | 1 | 1 | 0 | Unknown | False | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | MBWA01000010.1:11760-17477:+ | gene-Q0045_ThermosaccDry | rna-Q0045_ThermosaccDry | cds-NP_009305.1_ThermosaccDry | 78.1 | 79.4 | Unannotated | 1 | 1 | 0 | Unknown | False | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_018044.1:23410-30649:+ | gene-Q0045_Sparadoxus | rna-Q0045_Sparadoxus | cds-NP_009305.1_Sparadoxus | 90.5 | 92.0 | Unannotated | 1 | 1 | 0 | Unknown | False | False | False | False |