Gene name: COQ2
Reference locus (S288C): YNR041C
Gene biotype: protein_coding
Description: 4-hydroxybenzoate polyprenyltransferase, mitochondrial; Para hydroxybenzoate polyprenyl transferase; catalyzes the second step in ubiquinone (coenzyme Q) biosynthesis; human COQ2, mutations in which are implicated in an increased risk of mutiple-system atrophy, can complement a yeast coq2 null mutant
Top 10 interactors (score): COQ3 (0.999); COQ1 (0.998); COQ8 (0.997); CAT5 (0.995); COQ5 (0.995); COQ6 (0.995); COQ9 (0.994); COQ4 (0.994); PAD1 (0.972); ATP2 (0.972); COX4 (0.959); COQ10 (0.934); COX10 (0.933); DLD1 (0.932); CYB2 (0.917); OLI1 (0.907); COX5A (0.906); MAS2 (0.904); MAS1 (0.904); TIM54 (0.9)
Homologues (species, bitscore): COQ2 (Homo sapiens, 234.2); Coq2 (Mus musculus, 227.6); coq2 (Danio rerio, 242.7); COQ2 (Xenopus tropicalis, 238.0); Coq2 (Drosophila melanogaster, 230.7); coq-2 (Caenorhabditis elegans, 177.9); PPT1 (Arabidopsis thaliana, 204.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:684191-685306:- | gene-YNR041C_AKU4011 | rna-NM_001183218.3_AKU4011 | cds-NP_014439.3_AKU4011 | 99.1 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:592102-593220:- | gene-YNR041C_BG1 | rna-NM_001183218.3_BG1 | cds-NP_014439.3_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:701638-702756:- | gene-YNR041C_Bruggeman | rna-NM_001183218.3_Bruggeman | cds-NP_014439.3_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:735903-737021:- | gene-YNR041C_CAT1 | rna-NM_001183218.3_CAT1 | cds-NP_014439.3_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:689964-691079:- | gene-YNR041C_CBS1585 | rna-NM_001183218.3_CBS1585 | cds-NP_014439.3_CBS1585 | 99.1 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:751604-752722:- | gene-YNR041C_CBS436 | rna-NM_001183218.3_CBS436 | cds-NP_014439.3_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:679131-680246:- | gene-YNR041C_CBS6412 | rna-NM_001183218.3_CBS6412 | cds-NP_014439.3_CBS6412 | 99.1 | 99.7 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:680837-681952:- | gene-YNR041C_CBS6413 | rna-NM_001183218.3_CBS6413 | cds-NP_014439.3_CBS6413 | 99.1 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:694290-695408:- | gene-YNR041C_CENPK1137D | rna-NM_001183218.3_CENPK1137D | cds-NP_014439.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:685858-686973:- | gene-YNR041C_EthanolRed | rna-NM_001183218.3_EthanolRed | cds-NP_014439.3_EthanolRed | 99.1 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:677061-678176:- | gene-YNR041C_FaliES1 | rna-NM_001183218.3_FaliES1 | cds-NP_014439.3_FaliES1 | 99.1 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000037.1:24573-25691:+ | gene-YNR041C_JAY291 | rna-NM_001183218.3_JAY291 | cds-NP_014439.3_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:699397-700515:- | gene-YNR041C_MUCL30387 | rna-NM_001183218.3_MUCL30387 | cds-NP_014439.3_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:740216-741334:- | gene-YNR041C_MUCL30388 | rna-NM_001183218.3_MUCL30388 | cds-NP_014439.3_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:681433-682548:- | gene-YNR041C_MUCL39482 | rna-NM_001183218.3_MUCL39482 | cds-NP_014439.3_MUCL39482 | 99.1 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:685601-686719:- | gene-YNR041C_MUCL42920 | rna-NM_001183218.3_MUCL42920 | cds-NP_014439.3_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:700510-701628:- | gene-YNR041C_NCIM3186 | rna-NM_001183218.3_NCIM3186 | cds-NP_014439.3_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:683951-685066:- | gene-YNR041C_NCYC1407 | rna-NM_001183218.3_NCYC1407 | cds-NP_014439.3_NCYC1407 | 99.1 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:685038-686156:- | gene-YNR041C_PE2H3 | rna-NM_001183218.3_PE2H3 | cds-NP_014439.3_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:686356-687474:- | gene-YNR041C_PE2H4 | rna-NM_001183218.3_PE2H4 | cds-NP_014439.3_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:700541-701659:- | gene-YNR041C_S288C | rna-NM_001183218.3_S288C | cds-NP_014439.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000074.1:24721-25839:+ | gene-YNR041C_SA1 | rna-NM_001183218.3_SA1 | cds-NP_014439.3_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:677398-678513:- | gene-YNR041C_ThermosaccDry | rna-NM_001183218.3_ThermosaccDry | cds-NP_014439.3_ThermosaccDry | 99.1 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:719414-720532:- | gene-YNR041C_VR1 | rna-NM_001183218.3_VR1 | cds-NP_014439.3_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:586800-587915:- | gene-YNR041C_ZTW1 | rna-NM_001183218.3_ZTW1 | cds-NP_014439.3_ZTW1 | 99.1 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:691485-692591:- | gene-YNR041C_Sparadoxus | rna-NM_001183218.3_Sparadoxus | cds-NP_014439.3_Sparadoxus | 89.0 | 98.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |