Gene name: COQ1
Reference locus (S288C): YBR003W
Gene biotype: protein_coding
Description: Hexaprenyl pyrophosphate synthetase; catalyzes the first step in ubiquinone (coenzyme Q) biosynthesis; Belongs to the FPP/GGPP synthase family
Top 10 interactors (score): COQ5 (0.999); COQ2 (0.998); COQ3 (0.995); COQ6 (0.993); COQ8 (0.993); COQ4 (0.992); COQ9 (0.992); ERG20 (0.989); CAT5 (0.981); BTS1 (0.971); ERG9 (0.969); MAS1 (0.962); RER2 (0.957); YAH1 (0.95); RAM1 (0.934); SRT1 (0.93); NUS1 (0.922); COQ11 (0.917); RAM2 (0.908); COQ10 (0.9)
Homologues (species, bitscore): PDSS1 (Homo sapiens, 204.5); Pdss1 (Mus musculus, 214.2); pdss1 (Danio rerio, 231.5); pdss1 (Xenopus tropicalis, 229.2); qless (Drosophila melanogaster, 223.8); coq-1 (Caenorhabditis elegans, 208.0); SPS1 (Arabidopsis thaliana, 217.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:231195-232616:+ | gene-YBR003W_AKU4011 | rna-NM_001178351.1_AKU4011 | cds-NP_009557.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:221303-222724:+ | gene-YBR003W_BG1 | rna-NM_001178351.1_BG1 | cds-NP_009557.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:231894-233315:+ | gene-YBR003W_Bruggeman | rna-NM_001178351.1_Bruggeman | cds-NP_009557.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:234185-235606:+ | gene-YBR003W_CAT1 | rna-NM_001178351.1_CAT1 | cds-NP_009557.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:223233-224654:+ | gene-YBR003W_CBS1585 | rna-NM_001178351.1_CBS1585 | cds-NP_009557.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:231475-232896:+ | gene-YBR003W_CBS436 | rna-NM_001178351.1_CBS436 | cds-NP_009557.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:321735-323156:+ | gene-YBR003W_CBS6412 | rna-NM_001178351.1_CBS6412 | cds-NP_009557.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:228598-230019:+ | gene-YBR003W_CBS6413 | rna-NM_001178351.1_CBS6413 | cds-NP_009557.1_CBS6413 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:242495-243916:+ | gene-YBR003W_CENPK1137D | rna-NM_001178351.1_CENPK1137D | cds-NP_009557.1_CENPK1137D | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:358193-359614:+ | gene-YBR003W_EthanolRed | rna-NM_001178351.1_EthanolRed | cds-NP_009557.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:246289-247710:+ | gene-YBR003W_FaliES1 | rna-NM_001178351.1_FaliES1 | cds-NP_009557.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000048.1:49888-51309:- | gene-YBR003W_JAY291 | rna-NM_001178351.1_JAY291 | cds-NP_009557.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:232252-233673:+ | gene-YBR003W_MUCL30387 | rna-NM_001178351.1_MUCL30387 | cds-NP_009557.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:232192-233613:+ | gene-YBR003W_MUCL30388 | rna-NM_001178351.1_MUCL30388 | cds-NP_009557.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:223214-224635:+ | gene-YBR003W_MUCL39482 | rna-NM_001178351.1_MUCL39482 | cds-NP_009557.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:230654-232075:+ | gene-YBR003W_MUCL42920 | rna-NM_001178351.1_MUCL42920 | cds-NP_009557.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:242606-244027:+ | gene-YBR003W_NCIM3186 | rna-NM_001178351.1_NCIM3186 | cds-NP_009557.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:224389-225810:+ | gene-YBR003W_NCYC1407 | rna-NM_001178351.1_NCYC1407 | cds-NP_009557.1_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:236550-237971:+ | gene-YBR003W_PE2H3 | rna-NM_001178351.1_PE2H3 | cds-NP_009557.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:234216-235637:+ | gene-YBR003W_PE2H4 | rna-NM_001178351.1_PE2H4 | cds-NP_009557.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:242809-244230:+ | gene-YBR003W_S288C | rna-NM_001178351.1_S288C | cds-NP_009557.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000037.1:58543-59964:- | gene-YBR003W_SA1 | rna-NM_001178351.1_SA1 | cds-NP_009557.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:245998-247419:+ | gene-YBR003W_ThermosaccDry | rna-NM_001178351.1_ThermosaccDry | cds-NP_009557.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:227891-229312:+ | gene-YBR003W_VR1 | rna-NM_001178351.1_VR1 | cds-NP_009557.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:221979-223400:+ | gene-YBR003W_ZTW1 | rna-NM_001178351.1_ZTW1 | cds-NP_009557.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:257680-259101:+ | gene-YBR003W_Sparadoxus | rna-NM_001178351.1_Sparadoxus | cds-NP_009557.1_Sparadoxus | 90.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |