Gene name: COG3
Reference locus (S288C): YER157W
Gene biotype: protein_coding
Description: Conserved oligomeric golgi complex subunit 3; Essential component of the conserved oligomeric Golgi complex; a cytosolic tethering complex (Cog1p through Cog8p) that functions in protein trafficking to mediate fusion of transport vesicles to Golgi compartments
Top 10 interactors (score): COG2 (0.999); COG8 (0.999); COG6 (0.999); COG4 (0.999); COG1 (0.998); COG5 (0.992); COG7 (0.988); SLY1 (0.978); VPS52 (0.968); VPS54 (0.962); VPS53 (0.956); YPT1 (0.955); BET3 (0.947); EXO70 (0.943); SEC22 (0.938); SEC21 (0.933); SED5 (0.92); USO1 (0.919); BET1 (0.914); YKT6 (0.912)
Homologues (species, bitscore): COG3 (Homo sapiens, 157.5); Cog3 (Mus musculus, 158.7); cog3 (Danio rerio, 174.9); cog3 (Xenopus tropicalis, 162.9); Cog3 (Drosophila melanogaster, 189.9); cogc-3 (Caenorhabditis elegans, 110.2); AT1G73430 (Arabidopsis thaliana, 172.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:472297-474702:+ | gene-YER157W_AKU4011 | rna-NM_001179047.1_AKU4011 | cds-NP_011084.1_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000176.1:58343-60748:- | gene-YER157W_BG1 | rna-NM_001179047.1_BG1 | cds-NP_011084.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:483575-485980:+ | gene-YER157W_Bruggeman | rna-NM_001179047.1_Bruggeman | cds-NP_011084.1_Bruggeman | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:471421-473826:+ | gene-YER157W_CAT1 | rna-NM_001179047.1_CAT1 | cds-NP_011084.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:472107-474512:+ | gene-YER157W_CBS1585 | rna-NM_001179047.1_CBS1585 | cds-NP_011084.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:475918-478323:+ | gene-YER157W_CBS436 | rna-NM_001179047.1_CBS436 | cds-NP_011084.1_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:470625-473030:+ | gene-YER157W_CBS6412 | rna-NM_001179047.1_CBS6412 | cds-NP_011084.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:478661-481066:+ | gene-YER157W_CBS6413 | rna-NM_001179047.1_CBS6413 | cds-NP_011084.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:482561-484966:+ | gene-YER157W_CENPK1137D | rna-NM_001179047.1_CENPK1137D | cds-NP_011084.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:478578-480983:+ | gene-YER157W_EthanolRed | rna-NM_001179047.1_EthanolRed | cds-NP_011084.1_EthanolRed | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:479164-481569:+ | gene-YER157W_FaliES1 | rna-NM_001179047.1_FaliES1 | cds-NP_011084.1_FaliES1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000111.1:4924-7329:- | gene-YER157W_JAY291 | rna-NM_001179047.1_JAY291 | cds-NP_011084.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:472325-474730:+ | gene-YER157W_MUCL30387 | rna-NM_001179047.1_MUCL30387 | cds-NP_011084.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:475224-477629:+ | gene-YER157W_MUCL30388 | rna-NM_001179047.1_MUCL30388 | cds-NP_011084.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:468064-470469:+ | gene-YER157W_MUCL39482 | rna-NM_001179047.1_MUCL39482 | cds-NP_011084.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:480391-482796:+ | gene-YER157W_MUCL42920 | rna-NM_001179047.1_MUCL42920 | cds-NP_011084.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:484787-487192:+ | gene-YER157W_NCIM3186 | rna-NM_001179047.1_NCIM3186 | cds-NP_011084.1_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:477530-479935:+ | gene-YER157W_NCYC1407 | rna-NM_001179047.1_NCYC1407 | cds-NP_011084.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:493210-495615:+ | gene-YER157W_PE2H3 | rna-NM_001179047.1_PE2H3 | cds-NP_011084.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:483151-485556:+ | gene-YER157W_PE2H4 | rna-NM_001179047.1_PE2H4 | cds-NP_011084.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:484788-487193:+ | gene-YER157W_S288C | rna-NM_001179047.1_S288C | cds-NP_011084.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000030.1:42690-45095:+ | gene-YER157W_SA1 | rna-NM_001179047.1_SA1 | cds-NP_011084.1_SA1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:479964-482369:+ | gene-YER157W_ThermosaccDry | rna-NM_001179047.1_ThermosaccDry | cds-NP_011084.1_ThermosaccDry | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:473075-475480:+ | gene-YER157W_VR1 | rna-NM_001179047.1_VR1 | cds-NP_011084.1_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000010.1:34923-37328:+ | gene-YER157W_ZTW1 | rna-NM_001179047.1_ZTW1 | cds-NP_011084.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:481003-483408:+ | gene-YER157W_Sparadoxus | rna-NM_001179047.1_Sparadoxus | cds-NP_011084.1_Sparadoxus | 88.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |