Gene name: COG2
Reference locus (S288C): YGR120C
Gene biotype: protein_coding
Description: Essential component of the conserved oligomeric Golgi complex; a cytosolic tethering complex that functions in protein trafficking to mediate fusion of transport vesicles to Golgi compartments; the components of the Golgi complex are Gog1p through Cog8p
Top 10 interactors (score): COG4 (0.999); COG1 (0.999); COG3 (0.999); COG8 (0.996); COG5 (0.996); COG6 (0.996); COG7 (0.992); BET1 (0.922); USO1 (0.908); SLY1 (0.895); YPT1 (0.895); SED5 (0.868); RUD3 (0.851); SEC22 (0.82); BET3 (0.793); ATG17 (0.791); COY1 (0.777); SEC21 (0.77); SNX4 (0.764); YKT6 (0.764)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:709352-710140:- | gene-YGR120C_AKU4011 | rna-NM_001181249.1_AKU4011 | cds-NP_011635.2_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000188.1:17826-18614:- | gene-YGR120C_BG1 | rna-NM_001181249.1_BG1 | cds-NP_011635.2_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:711017-711805:- | gene-YGR120C_Bruggeman | rna-NM_001181249.1_Bruggeman | cds-NP_011635.2_Bruggeman | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:709244-710032:- | gene-YGR120C_CAT1 | rna-NM_001181249.1_CAT1 | cds-NP_011635.2_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:710341-711129:- | gene-YGR120C_CBS1585 | rna-NM_001181249.1_CBS1585 | cds-NP_011635.2_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:711965-712753:- | gene-YGR120C_CBS436 | rna-NM_001181249.1_CBS436 | cds-NP_011635.2_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:702010-702798:- | gene-YGR120C_CBS6412 | rna-NM_001181249.1_CBS6412 | cds-NP_011635.2_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:706944-707732:- | gene-YGR120C_CBS6413 | rna-NM_001181249.1_CBS6413 | cds-NP_011635.2_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:729751-730539:- | gene-YGR120C_CENPK1137D | rna-NM_001181249.1_CENPK1137D | cds-NP_011635.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:696435-697223:- | gene-YGR120C_EthanolRed | rna-NM_001181249.1_EthanolRed | cds-NP_011635.2_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:700244-701032:- | gene-YGR120C_FaliES1 | rna-NM_001181249.1_FaliES1 | cds-NP_011635.2_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000309.1:2618-3406:- | gene-YGR120C_JAY291 | rna-NM_001181249.1_JAY291 | cds-NP_011635.2_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:710441-711229:- | gene-YGR120C_MUCL30387 | rna-NM_001181249.1_MUCL30387 | cds-NP_011635.2_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:710831-711619:- | gene-YGR120C_MUCL30388 | rna-NM_001181249.1_MUCL30388 | cds-NP_011635.2_MUCL30388 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:706068-706856:- | gene-YGR120C_MUCL39482 | rna-NM_001181249.1_MUCL39482 | cds-NP_011635.2_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:715841-716629:- | gene-YGR120C_MUCL42920 | rna-NM_001181249.1_MUCL42920 | cds-NP_011635.2_MUCL42920 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:730033-730821:- | gene-YGR120C_NCIM3186 | rna-NM_001181249.1_NCIM3186 | cds-NP_011635.2_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:700761-701549:- | gene-YGR120C_NCYC1407 | rna-NM_001181249.1_NCYC1407 | cds-NP_011635.2_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:714338-715126:- | gene-YGR120C_PE2H3 | rna-NM_001181249.1_PE2H3 | cds-NP_011635.2_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:719456-720244:- | gene-YGR120C_PE2H4 | rna-NM_001181249.1_PE2H4 | cds-NP_011635.2_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:730033-730821:- | gene-YGR120C_S288C | rna-NM_001181249.1_S288C | cds-NP_011635.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000015.1:151369-152157:- | gene-YGR120C_SA1 | rna-NM_001181249.1_SA1 | cds-NP_011635.2_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:720623-721411:- | gene-YGR120C_ThermosaccDry | rna-NM_001181249.1_ThermosaccDry | cds-NP_011635.2_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:823056-823844:- | gene-YGR120C_VR1 | rna-NM_001181249.1_VR1 | cds-NP_011635.2_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000016.1:23018-23806:- | gene-YGR120C_ZTW1 | rna-NM_001181249.1_ZTW1 | cds-NP_011635.2_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:710491-711279:- | gene-YGR120C_Sparadoxus | rna-NM_001181249.1_Sparadoxus | cds-NP_011635.2_Sparadoxus | 89.4 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |