Gene name: COA1
Reference locus (S288C): YIL157C
Gene biotype: protein_coding
Description: Cytochrome c oxidase assembly factor 1; Mitochondrial inner membrane protein; required for assembly of the cytochrome c oxidase complex (complex IV); interacts with complex IV assembly factor Shy1p during the early stages of assembly
Top 10 interactors (score): COX14 (0.975); MSS51 (0.966); COA3 (0.942); COX1 (0.94); SHY1 (0.937); PUF3 (0.77); OMS1 (0.765); MAM33 (0.757); AIM34 (0.752); YIL154C (0.747); YGL214W (0.717); COA4 (0.707); AIM24 (0.699); QRI5 (0.697); PAU20 (0.696); AIM20 (0.696); OPI7 (0.694); RMD9 (0.694); YJR154W (0.692); MRPL6 (0.686)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:48157-48750:- | gene-YIL157C_AKU4011 | rna-NM_001179505.1_AKU4011 | cds-NP_012109.1_AKU4011 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000174.1:88623-89216:+ | gene-YIL157C_BG1 | rna-NM_001179505.1_BG1 | cds-NP_012109.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:50926-51519:- | gene-YIL157C_Bruggeman | rna-NM_001179505.1_Bruggeman | cds-NP_012109.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:44733-45326:- | gene-YIL157C_CAT1 | rna-NM_001179505.1_CAT1 | cds-NP_012109.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:48363-48956:- | gene-YIL157C_CBS1585 | rna-NM_001179505.1_CBS1585 | cds-NP_012109.1_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005351.1:39514-40107:- | gene-YIL157C_CBS436 | rna-NM_001179505.1_CBS436 | cds-NP_012109.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005335.1:45889-46482:- | gene-YIL157C_CBS6412 | rna-NM_001179505.1_CBS6412 | cds-NP_012109.1_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:40045-40638:- | gene-YIL157C_CBS6413 | rna-NM_001179505.1_CBS6413 | cds-NP_012109.1_CBS6413 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:38654-39247:- | gene-YIL157C_CENPK1137D | rna-NM_001179505.1_CENPK1137D | cds-NP_012109.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005479.1:33690-34283:- | gene-YIL157C_EthanolRed | rna-NM_001179505.1_EthanolRed | cds-NP_012109.1_EthanolRed | 98.9 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:49494-50087:- | gene-YIL157C_FaliES1 | rna-NM_001179505.1_FaliES1 | cds-NP_012109.1_FaliES1 | 98.9 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000319.1:58267-58860:+ | gene-YIL157C_JAY291 | rna-NM_001179505.1_JAY291 | cds-NP_012109.1_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:48683-49276:- | gene-YIL157C_MUCL30387 | rna-NM_001179505.1_MUCL30387 | cds-NP_012109.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005447.1:47920-48513:- | gene-YIL157C_MUCL30388 | rna-NM_001179505.1_MUCL30388 | cds-NP_012109.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:49286-49879:- | gene-YIL157C_MUCL39482 | rna-NM_001179505.1_MUCL39482 | cds-NP_012109.1_MUCL39482 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:52506-53099:- | gene-YIL157C_MUCL42920 | rna-NM_001179505.1_MUCL42920 | cds-NP_012109.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:46949-47542:- | gene-YIL157C_NCIM3186 | rna-NM_001179505.1_NCIM3186 | cds-NP_012109.1_NCIM3186 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005271.1:53255-53848:- | gene-YIL157C_NCYC1407 | rna-NM_001179505.1_NCYC1407 | cds-NP_012109.1_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:47871-48464:- | gene-YIL157C_PE2H3 | rna-NM_001179505.1_PE2H3 | cds-NP_012109.1_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:41833-42426:- | gene-YIL157C_PE2H4 | rna-NM_001179505.1_PE2H4 | cds-NP_012109.1_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:46949-47542:- | gene-YIL157C_S288C | rna-NM_001179505.1_S288C | cds-NP_012109.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000050.1:25518-26111:- | gene-YIL157C_SA1 | rna-NM_001179505.1_SA1 | cds-NP_012109.1_SA1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:48103-48696:- | gene-YIL157C_ThermosaccDry | rna-NM_001179505.1_ThermosaccDry | cds-NP_012109.1_ThermosaccDry | 98.9 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:45297-45890:- | gene-YIL157C_VR1 | rna-NM_001179505.1_VR1 | cds-NP_012109.1_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000019.1:23084-23677:- | gene-YIL157C_ZTW1 | rna-NM_001179505.1_ZTW1 | cds-NP_012109.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:40866-41459:- | gene-YIL157C_Sparadoxus | rna-NM_001179505.1_Sparadoxus | cds-NP_012109.1_Sparadoxus | 89.5 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |