Gene name: CMG1
Reference locus (S288C): YLR271W
Gene biotype: protein_coding
Description: Uncharacterized protein YLR271W; Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus and is induced in response to the DNA-damaging agent MMS
Top 10 interactors (score): CRM1 (0.962); MSN5 (0.819); SPP2 (0.767); SWM2 (0.766); NTR2 (0.755); PXR1 (0.744); SQS1 (0.715); MIC10 (0.712); SPP382 (0.698); TGS1 (0.68); TIM21 (0.67); PRP43 (0.661); PRP2 (0.624); CDC5 (0.621); EMW1 (0.616); RPS20 (0.593); TIM44 (0.567); PCM1 (0.563); VTS1 (0.558); ESF2 (0.472)
Homologues (species, bitscore): GPATCH11 (Homo sapiens, 57.8); Gpatch11 (Mus musculus, 55.8); gpatch11 (Danio rerio, 63.2); gpatch11 (Xenopus tropicalis, 59.7); CG10053 (Drosophila melanogaster, 52.8); T04H1.5 (Caenorhabditis elegans, 59.3); AT3G57910 (Arabidopsis thaliana, 69.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:630983-631807:+ | gene-YLR271W_AKU4011 | rna-NM_001182158.1_AKU4011 | cds-NP_013373.1_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000170.1:100074-100898:- | gene-YLR271W_BG1 | rna-NM_001182158.1_BG1 | cds-NP_013373.1_BG1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:665244-666068:+ | gene-YLR271W_Bruggeman | rna-NM_001182158.1_Bruggeman | cds-NP_013373.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:664429-665253:+ | gene-YLR271W_CAT1 | rna-NM_001182158.1_CAT1 | cds-NP_013373.1_CAT1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:666478-667302:+ | gene-YLR271W_CBS1585 | rna-NM_001182158.1_CBS1585 | cds-NP_013373.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:650715-651539:+ | gene-YLR271W_CBS436 | rna-NM_001182158.1_CBS436 | cds-NP_013373.1_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:629453-630277:+ | gene-YLR271W_CBS6412 | rna-NM_001182158.1_CBS6412 | cds-NP_013373.1_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:666774-667598:+ | gene-YLR271W_CBS6413 | rna-NM_001182158.1_CBS6413 | cds-NP_013373.1_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:667314-668138:+ | gene-YLR271W_CENPK1137D | rna-NM_001182158.1_CENPK1137D | cds-NP_013373.1_CENPK1137D | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:625184-626008:+ | gene-YLR271W_EthanolRed | rna-NM_001182158.1_EthanolRed | cds-NP_013373.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:654015-654839:+ | gene-YLR271W_FaliES1 | rna-NM_001182158.1_FaliES1 | cds-NP_013373.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000136.1:4555-5378:- | gene-YLR271W_JAY291 | rna-NM_001182158.1_JAY291 | cds-NP_013373.1_JAY291 | 98.7 | 99.8 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:666099-666923:+ | gene-YLR271W_MUCL30387 | rna-NM_001182158.1_MUCL30387 | cds-NP_013373.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:670866-671690:+ | gene-YLR271W_MUCL30388 | rna-NM_001182158.1_MUCL30388 | cds-NP_013373.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:667459-668283:+ | gene-YLR271W_MUCL39482 | rna-NM_001182158.1_MUCL39482 | cds-NP_013373.1_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:662245-663069:+ | gene-YLR271W_MUCL42920 | rna-NM_001182158.1_MUCL42920 | cds-NP_013373.1_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:682711-683535:+ | gene-YLR271W_NCIM3186 | rna-NM_001182158.1_NCIM3186 | cds-NP_013373.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:654447-655271:+ | gene-YLR271W_NCYC1407 | rna-NM_001182158.1_NCYC1407 | cds-NP_013373.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:658234-659058:+ | gene-YLR271W_PE2H3 | rna-NM_001182158.1_PE2H3 | cds-NP_013373.1_PE2H3 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:657978-658802:+ | gene-YLR271W_PE2H4 | rna-NM_001182158.1_PE2H4 | cds-NP_013373.1_PE2H4 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:682737-683561:+ | gene-YLR271W_S288C | rna-NM_001182158.1_S288C | cds-NP_013373.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000013.1:4798-5622:- | gene-YLR271W_SA1 | rna-NM_001182158.1_SA1 | cds-NP_013373.1_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:655968-656792:+ | gene-YLR271W_ThermosaccDry | rna-NM_001182158.1_ThermosaccDry | cds-NP_013373.1_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:667304-668128:+ | gene-YLR271W_VR1 | rna-NM_001182158.1_VR1 | cds-NP_013373.1_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000024.1:180266-181090:+ | gene-YLR271W_ZTW1 | rna-NM_001182158.1_ZTW1 | cds-NP_013373.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:641854-642681:+ | gene-YLR271W_Sparadoxus | rna-NM_001182158.1_Sparadoxus | cds-NP_013373.1_Sparadoxus | 82.2 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |