Gene name: CLD1
Reference locus (S288C): YGR110W
Gene biotype: protein_coding
Description: Mitochondrial cardiolipin-specific phospholipase; functions upstream of Taz1p to generate monolyso-cardiolipin; transcription increases upon genotoxic stress; involved in restricting Ty1 transposition; has homology to mammalian CGI-58; Belongs to the peptidase S33 family. ABHD4/ABHD5 subfamily
Top 10 interactors (score): CRD1 (0.975); TAZ1 (0.971); GEP4 (0.856); DDL1 (0.855); MOH1 (0.834); PGS1 (0.814); TAM41 (0.813); PGC1 (0.793); UPS1 (0.76); CST26 (0.718); PSD1 (0.704); UPS2 (0.703); NTE1 (0.7); PLB3 (0.676); YJU3 (0.665); ALE1 (0.662); DGA1 (0.646); PLB2 (0.617); CDS1 (0.598); AIM25 (0.572)
Homologues (species, bitscore): ABHD4 (Homo sapiens, 82.8); Abhd4 (Mus musculus, 80.1); abhd4 (Danio rerio, 84.0); abhd4 (Xenopus tropicalis, 84.7); CG1882 (Drosophila melanogaster, 70.5); C37H5.3 (Caenorhabditis elegans, 71.6); AT4G24160 (Arabidopsis thaliana, 107.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:693027-694364:+ | gene-YGR110W_AKU4011 | rna-NM_001181239.3_AKU4011 | cds-NP_011625.3_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000188.1:1492-2829:+ | gene-YGR110W_BG1 | rna-NM_001181239.3_BG1 | cds-NP_011625.3_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:694709-696046:+ | gene-YGR110W_Bruggeman | rna-NM_001181239.3_Bruggeman | cds-NP_011625.3_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:692911-694248:+ | gene-YGR110W_CAT1 | rna-NM_001181239.3_CAT1 | cds-NP_011625.3_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:694017-695354:+ | gene-YGR110W_CBS1585 | rna-NM_001181239.3_CBS1585 | cds-NP_011625.3_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:695641-696978:+ | gene-YGR110W_CBS436 | rna-NM_001181239.3_CBS436 | cds-NP_011625.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:685686-687023:+ | gene-YGR110W_CBS6412 | rna-NM_001181239.3_CBS6412 | cds-NP_011625.3_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:690620-691957:+ | gene-YGR110W_CBS6413 | rna-NM_001181239.3_CBS6413 | cds-NP_011625.3_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:713428-714765:+ | gene-YGR110W_CENPK1137D | rna-NM_001181239.3_CENPK1137D | cds-NP_011625.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:680128-681465:+ | gene-YGR110W_EthanolRed | rna-NM_001181239.3_EthanolRed | cds-NP_011625.3_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:683919-685256:+ | gene-YGR110W_FaliES1 | rna-NM_001181239.3_FaliES1 | cds-NP_011625.3_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000092.1:12386-13723:- | gene-YGR110W_JAY291 | rna-NM_001181239.3_JAY291 | cds-NP_011625.3_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:692263-693600:+ | gene-YGR110W_MUCL30387 | rna-NM_001181239.3_MUCL30387 | cds-NP_011625.3_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:694521-695858:+ | gene-YGR110W_MUCL30388 | rna-NM_001181239.3_MUCL30388 | cds-NP_011625.3_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:689744-691081:+ | gene-YGR110W_MUCL39482 | rna-NM_001181239.3_MUCL39482 | cds-NP_011625.3_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:699531-700868:+ | gene-YGR110W_MUCL42920 | rna-NM_001181239.3_MUCL42920 | cds-NP_011625.3_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:713709-715046:+ | gene-YGR110W_NCIM3186 | rna-NM_001181239.3_NCIM3186 | cds-NP_011625.3_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:684437-685774:+ | gene-YGR110W_NCYC1407 | rna-NM_001181239.3_NCYC1407 | cds-NP_011625.3_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:698004-699341:+ | gene-YGR110W_PE2H3 | rna-NM_001181239.3_PE2H3 | cds-NP_011625.3_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:703122-704459:+ | gene-YGR110W_PE2H4 | rna-NM_001181239.3_PE2H4 | cds-NP_011625.3_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:713709-715046:+ | gene-YGR110W_S288C | rna-NM_001181239.3_S288C | cds-NP_011625.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000015.1:135025-136362:+ | gene-YGR110W_SA1 | rna-NM_001181239.3_SA1 | cds-NP_011625.3_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:704299-705636:+ | gene-YGR110W_ThermosaccDry | rna-NM_001181239.3_ThermosaccDry | cds-NP_011625.3_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:806722-808059:+ | gene-YGR110W_VR1 | rna-NM_001181239.3_VR1 | cds-NP_011625.3_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000016.1:6693-8030:+ | gene-YGR110W_ZTW1 | rna-NM_001181239.3_ZTW1 | cds-NP_011625.3_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:694269-695606:+ | gene-YGR110W_Sparadoxus | rna-NM_001181239.3_Sparadoxus | cds-NP_011625.3_Sparadoxus | 89.3 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |