Gene name: CLB5
Reference locus (S288C): YPR120C
Gene biotype: protein_coding
Description: S-phase entry cyclin-5; B-type cyclin involved in DNA replication during S phase; activates Cdc28p to promote initiation of DNA synthesis; functions in formation of mitotic spindles along with Clb3p and Clb4p; most abundant during late G1 phase; CLB5 has a paralog, CLB6, that arose from the whole genome duplication
Top 10 interactors (score): SIC1 (0.999); CDC28 (0.999); CDC6 (0.997); CDC20 (0.996); CLB6 (0.985); MIH1 (0.982); CKS1 (0.979); ORC6 (0.967); KIN28 (0.964); SWE1 (0.964); CCL1 (0.96); SWI4 (0.959); SLD2 (0.952); CDH1 (0.947); FAR1 (0.942); TFB3 (0.939); PDS1 (0.929); CLN3 (0.925); SWI6 (0.923); ORC1 (0.906)
Homologues (species, bitscore): CCNB1 (Homo sapiens, 164.1); Ccnb2 (Mus musculus, 161.0); ccnb2 (Danio rerio, 163.3); ccnb1 (Xenopus tropicalis, 167.5); CycB (Drosophila melanogaster, 134.4); cyb-2.1 (Caenorhabditis elegans, 122.5); CYCB2;1 (Arabidopsis thaliana, 152.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:745354-746658:- | gene-YPR120C_AKU4011 | rna-NM_001184217.1_AKU4011 | cds-NP_015445.1_AKU4011 | 99.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:150499-151806:+ | gene-YPR120C_BG1 | rna-NM_001184217.1_BG1 | cds-NP_015445.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:826061-827368:- | gene-YPR120C_Bruggeman | rna-NM_001184217.1_Bruggeman | cds-NP_015445.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:867654-868961:- | gene-YPR120C_CAT1 | rna-NM_001184217.1_CAT1 | cds-NP_015445.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:749611-750915:- | gene-YPR120C_CBS1585 | rna-NM_001184217.1_CBS1585 | cds-NP_015445.1_CBS1585 | 99.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:764261-765568:- | gene-YPR120C_CBS436 | rna-NM_001184217.1_CBS436 | cds-NP_015445.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:752334-753638:- | gene-YPR120C_CBS6412 | rna-NM_001184217.1_CBS6412 | cds-NP_015445.1_CBS6412 | 99.3 | 99.7 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:747057-748361:- | gene-YPR120C_CBS6413 | rna-NM_001184217.1_CBS6413 | cds-NP_015445.1_CBS6413 | 99.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:773861-775168:- | gene-YPR120C_CENPK1137D | rna-NM_001184217.1_CENPK1137D | cds-NP_015445.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:1071965-1073272:- | gene-YPR120C_EthanolRed | rna-NM_001184217.1_EthanolRed | cds-NP_015445.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:751512-752819:- | gene-YPR120C_FaliES1 | rna-NM_001184217.1_FaliES1 | cds-NP_015445.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000036.1:4551-5858:- | gene-YPR120C_JAY291 | rna-NM_001184217.1_JAY291 | cds-NP_015445.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:766252-767559:- | gene-YPR120C_MUCL30387 | rna-NM_001184217.1_MUCL30387 | cds-NP_015445.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:765030-766337:- | gene-YPR120C_MUCL30388 | rna-NM_001184217.1_MUCL30388 | cds-NP_015445.1_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:742118-743422:- | gene-YPR120C_MUCL39482 | rna-NM_001184217.1_MUCL39482 | cds-NP_015445.1_MUCL39482 | 99.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:806004-807311:- | gene-YPR120C_MUCL42920 | rna-NM_001184217.1_MUCL42920 | cds-NP_015445.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:773858-775165:- | gene-YPR120C_NCIM3186 | rna-NM_001184217.1_NCIM3186 | cds-NP_015445.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:750711-752015:- | gene-YPR120C_NCYC1407 | rna-NM_001184217.1_NCYC1407 | cds-NP_015445.1_NCYC1407 | 99.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:757638-758945:- | gene-YPR120C_PE2H3 | rna-NM_001184217.1_PE2H3 | cds-NP_015445.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:757286-758593:- | gene-YPR120C_PE2H4 | rna-NM_001184217.1_PE2H4 | cds-NP_015445.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:773875-775182:- | gene-YPR120C_S288C | rna-NM_001184217.1_S288C | cds-NP_015445.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000028.1:71668-72975:- | gene-YPR120C_SA1 | rna-NM_001184217.1_SA1 | cds-NP_015445.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:750957-752264:- | gene-YPR120C_ThermosaccDry | rna-NM_001184217.1_ThermosaccDry | cds-NP_015445.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:768283-769593:- | gene-YPR120C_VR1 | rna-NM_001184217.1_VR1 | cds-NP_015445.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:750354-751661:- | gene-YPR120C_ZTW1 | rna-NM_001184217.1_ZTW1 | cds-NP_015445.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:752021-753316:- | gene-YPR120C_Sparadoxus | rna-NM_001184217.1_Sparadoxus | cds-NP_015445.1_Sparadoxus | 88.0 | 98.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |