Gene name: CKB2
Reference locus (S288C): YOR039W
Gene biotype: protein_coding
Description: Beta' regulatory subunit of casein kinase 2 (CK2); a Ser/Thr protein kinase with roles in cell growth and proliferation; CK2, comprised of CKA1, CKA2, CKB1 and CKB2, has many substrates including transcription factors and all RNA polymerase
Top 10 interactors (score): CKA2 (0.999); CKB1 (0.999); CKA1 (0.999); POB3 (0.999); SPT16 (0.998); UTP22 (0.995); UTP10 (0.983); UTP18 (0.981); RRP7 (0.98); PWP2 (0.978); IMP3 (0.978); UTP15 (0.977); IMP4 (0.977); UTP13 (0.977); NAN1 (0.977); DIP2 (0.977); UTP8 (0.977); MPP10 (0.977); UTP9 (0.977); UTP21 (0.977)
Homologues (species, bitscore): CSNK2B (Homo sapiens, 203.8); Csnk2b (Mus musculus, 203.8); ck2b (Danio rerio, 203.8); csnk2b (Xenopus tropicalis, 181.0); CkIIbeta2 (Drosophila melanogaster, 200.7); kin-10 (Caenorhabditis elegans, 207.2); CKB4 (Arabidopsis thaliana, 204.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:390109-390885:+ | gene-YOR039W_AKU4011 | rna-NM_001183458.1_AKU4011 | cds-NP_014682.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000152.1:205685-206461:+ | gene-YOR039W_BG1 | rna-NM_001183458.1_BG1 | cds-NP_014682.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:392850-393626:+ | gene-YOR039W_Bruggeman | rna-NM_001183458.1_Bruggeman | cds-NP_014682.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:391003-391779:+ | gene-YOR039W_CAT1 | rna-NM_001183458.1_CAT1 | cds-NP_014682.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:384800-385576:+ | gene-YOR039W_CBS1585 | rna-NM_001183458.1_CBS1585 | cds-NP_014682.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:389154-389930:+ | gene-YOR039W_CBS436 | rna-NM_001183458.1_CBS436 | cds-NP_014682.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:384154-384930:+ | gene-YOR039W_CBS6412 | rna-NM_001183458.1_CBS6412 | cds-NP_014682.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:391529-392305:+ | gene-YOR039W_CBS6413 | rna-NM_001183458.1_CBS6413 | cds-NP_014682.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:405767-406543:+ | gene-YOR039W_CENPK1137D | rna-NM_001183458.1_CENPK1137D | cds-NP_014682.1_CENPK1137D | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:386807-387583:+ | gene-YOR039W_EthanolRed | rna-NM_001183458.1_EthanolRed | cds-NP_014682.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:390155-390931:+ | gene-YOR039W_FaliES1 | rna-NM_001183458.1_FaliES1 | cds-NP_014682.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000035.1:60802-61578:+ | gene-YOR039W_JAY291 | rna-NM_001183458.1_JAY291 | cds-NP_014682.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:397618-398394:+ | gene-YOR039W_MUCL30387 | rna-NM_001183458.1_MUCL30387 | cds-NP_014682.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:400922-401698:+ | gene-YOR039W_MUCL30388 | rna-NM_001183458.1_MUCL30388 | cds-NP_014682.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:392283-393059:+ | gene-YOR039W_MUCL39482 | rna-NM_001183458.1_MUCL39482 | cds-NP_014682.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:407097-407873:+ | gene-YOR039W_MUCL42920 | rna-NM_001183458.1_MUCL42920 | cds-NP_014682.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:405657-406433:+ | gene-YOR039W_NCIM3186 | rna-NM_001183458.1_NCIM3186 | cds-NP_014682.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:398985-399761:+ | gene-YOR039W_NCYC1407 | rna-NM_001183458.1_NCYC1407 | cds-NP_014682.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:397821-398597:+ | gene-YOR039W_PE2H3 | rna-NM_001183458.1_PE2H3 | cds-NP_014682.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:408202-408978:+ | gene-YOR039W_PE2H4 | rna-NM_001183458.1_PE2H4 | cds-NP_014682.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:405768-406544:+ | gene-YOR039W_S288C | rna-NM_001183458.1_S288C | cds-NP_014682.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000001.1:373686-374462:+ | gene-YOR039W_SA1 | rna-NM_001183458.1_SA1 | cds-NP_014682.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:388695-389471:+ | gene-YOR039W_ThermosaccDry | rna-NM_001183458.1_ThermosaccDry | cds-NP_014682.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:389584-390360:+ | gene-YOR039W_VR1 | rna-NM_001183458.1_VR1 | cds-NP_014682.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:123321-124097:+ | gene-YOR039W_ZTW1 | rna-NM_001183458.1_ZTW1 | cds-NP_014682.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:396042-396818:+ | gene-YOR039W_Sparadoxus | rna-NM_001183458.1_Sparadoxus | cds-NP_014682.1_Sparadoxus | 92.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |