Gene name: CKB1
Reference locus (S288C): YGL019W
Gene biotype: protein_coding
Description: Beta regulatory subunit of casein kinase 2 (CK2); a Ser/Thr protein kinase with roles in cell growth and proliferation; CK2, comprised of CKA1, CKA2, CKB1 and CKB2, has many substrates including transcription factors and all RNA polymerases
Top 10 interactors (score): CKB2 (0.999); RRP36 (0.999); CKA2 (0.999); CKA1 (0.999); UTP22 (0.999); UTP21 (0.998); RRP7 (0.998); UTP6 (0.998); UTP15 (0.998); IMP4 (0.998); IMP3 (0.998); POB3 (0.997); NOC4 (0.991); KRR1 (0.991); NOP19 (0.991); UTP7 (0.991); SLX9 (0.991); UTP10 (0.983); UTP18 (0.979); MPP10 (0.977)
Homologues (species, bitscore): CSNK2B (Homo sapiens, 176.4); Csnk2b (Mus musculus, 176.4); ck2b (Danio rerio, 176.4); csnk2b (Xenopus tropicalis, 158.7); CkIIbeta (Drosophila melanogaster, 169.9); kin-10 (Caenorhabditis elegans, 172.6); CKB2 (Arabidopsis thaliana, 176.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:460220-461056:+ | gene-YGL019W_AKU4011 | rna-NM_001180884.3_AKU4011 | cds-NP_011496.3_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000060.1:115083-115919:- | gene-YGL019W_BG1 | rna-NM_001180884.3_BG1 | cds-NP_011496.3_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:461173-462009:+ | gene-YGL019W_Bruggeman | rna-NM_001180884.3_Bruggeman | cds-NP_011496.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:459469-460305:+ | gene-YGL019W_CAT1 | rna-NM_001180884.3_CAT1 | cds-NP_011496.3_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:461691-462527:+ | gene-YGL019W_CBS1585 | rna-NM_001180884.3_CBS1585 | cds-NP_011496.3_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:456031-456867:+ | gene-YGL019W_CBS436 | rna-NM_001180884.3_CBS436 | cds-NP_011496.3_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:454306-455142:+ | gene-YGL019W_CBS6412 | rna-NM_001180884.3_CBS6412 | cds-NP_011496.3_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:458363-459199:+ | gene-YGL019W_CBS6413 | rna-NM_001180884.3_CBS6413 | cds-NP_011496.3_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:457993-458829:+ | gene-YGL019W_CENPK1137D | rna-NM_001180884.3_CENPK1137D | cds-NP_011496.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:448587-449423:+ | gene-YGL019W_EthanolRed | rna-NM_001180884.3_EthanolRed | cds-NP_011496.3_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:451825-452661:+ | gene-YGL019W_FaliES1 | rna-NM_001180884.3_FaliES1 | cds-NP_011496.3_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000177.1:20544-21380:+ | gene-YGL019W_JAY291 | rna-NM_001180884.3_JAY291 | cds-NP_011496.3_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:458402-459238:+ | gene-YGL019W_MUCL30387 | rna-NM_001180884.3_MUCL30387 | cds-NP_011496.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:460951-461787:+ | gene-YGL019W_MUCL30388 | rna-NM_001180884.3_MUCL30388 | cds-NP_011496.3_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:457530-458366:+ | gene-YGL019W_MUCL39482 | rna-NM_001180884.3_MUCL39482 | cds-NP_011496.3_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:466955-467791:+ | gene-YGL019W_MUCL42920 | rna-NM_001180884.3_MUCL42920 | cds-NP_011496.3_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:458156-458992:+ | gene-YGL019W_NCIM3186 | rna-NM_001180884.3_NCIM3186 | cds-NP_011496.3_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:451552-452388:+ | gene-YGL019W_NCYC1407 | rna-NM_001180884.3_NCYC1407 | cds-NP_011496.3_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:454209-455045:+ | gene-YGL019W_PE2H3 | rna-NM_001180884.3_PE2H3 | cds-NP_011496.3_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:459259-460095:+ | gene-YGL019W_PE2H4 | rna-NM_001180884.3_PE2H4 | cds-NP_011496.3_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:458156-458992:+ | gene-YGL019W_S288C | rna-NM_001180884.3_S288C | cds-NP_011496.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000021.1:96608-97444:- | gene-YGL019W_SA1 | rna-NM_001180884.3_SA1 | cds-NP_011496.3_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:471150-471986:+ | gene-YGL019W_ThermosaccDry | rna-NM_001180884.3_ThermosaccDry | cds-NP_011496.3_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:561225-562061:+ | gene-YGL019W_VR1 | rna-NM_001180884.3_VR1 | cds-NP_011496.3_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:449775-450611:+ | gene-YGL019W_ZTW1 | rna-NM_001180884.3_ZTW1 | cds-NP_011496.3_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:459383-460219:+ | gene-YGL019W_Sparadoxus | rna-NM_001180884.3_Sparadoxus | cds-NP_011496.3_Sparadoxus | 93.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |