Gene name: CKA1
Reference locus (S288C): YIL035C
Gene biotype: protein_coding
Description: Alpha catalytic subunit of casein kinase 2 (CK2); a Ser/Thr protein kinase with roles in cell growth and proliferation; CK2, comprised of CKA1, CKA2, CKB1 and CKB2, has many substrates including transcription factors and all RNA polymerases; regulates Fkh1p-mediated donor preference during mating-type switching
Top 10 interactors (score): UTP7 (0.999); UTP22 (0.999); CKB1 (0.999); CKA2 (0.999); RRP7 (0.999); LCP5 (0.999); CKB2 (0.999); RRP36 (0.999); ESF1 (0.999); UTP18 (0.999); IMP3 (0.998); POB3 (0.994); KRR1 (0.993); NOP19 (0.992); SPT16 (0.991); SLX9 (0.991); IMP4 (0.977); UTP13 (0.977); UTP8 (0.977); UTP15 (0.977)
Homologues (species, bitscore): CSNK2A1 (Homo sapiens, 422.5); Csnk2a1 (Mus musculus, 422.9); zgc:86598 (Danio rerio, 427.2); csnk2a2 (Xenopus tropicalis, 421.0); CkIIalpha (Drosophila melanogaster, 424.1); kin-3 (Caenorhabditis elegans, 403.3); CKA1 (Arabidopsis thaliana, 411.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:284618-285736:- | gene-YIL035C_AKU4011 | rna-NM_001179385.1_AKU4011 | cds-NP_012229.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000164.1:146071-147189:- | gene-YIL035C_BG1 | rna-NM_001179385.1_BG1 | cds-NP_012229.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:290890-292008:- | gene-YIL035C_Bruggeman | rna-NM_001179385.1_Bruggeman | cds-NP_012229.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:278806-279924:- | gene-YIL035C_CAT1 | rna-NM_001179385.1_CAT1 | cds-NP_012229.1_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:284446-285564:- | gene-YIL035C_CBS1585 | rna-NM_001179385.1_CBS1585 | cds-NP_012229.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005351.1:279768-280886:- | gene-YIL035C_CBS436 | rna-NM_001179385.1_CBS436 | cds-NP_012229.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005335.1:281061-282179:- | gene-YIL035C_CBS6412 | rna-NM_001179385.1_CBS6412 | cds-NP_012229.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:276609-277727:- | gene-YIL035C_CBS6413 | rna-NM_001179385.1_CBS6413 | cds-NP_012229.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:279702-280820:- | gene-YIL035C_CENPK1137D | rna-NM_001179385.1_CENPK1137D | cds-NP_012229.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005479.1:268532-269650:- | gene-YIL035C_EthanolRed | rna-NM_001179385.1_EthanolRed | cds-NP_012229.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:286071-287189:- | gene-YIL035C_FaliES1 | rna-NM_001179385.1_FaliES1 | cds-NP_012229.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000365.1:11677-12795:+ | gene-YIL035C_JAY291 | rna-NM_001179385.1_JAY291 | cds-NP_012229.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:287740-288858:- | gene-YIL035C_MUCL30387 | rna-NM_001179385.1_MUCL30387 | cds-NP_012229.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005447.1:284343-285461:- | gene-YIL035C_MUCL30388 | rna-NM_001179385.1_MUCL30388 | cds-NP_012229.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:285286-286404:- | gene-YIL035C_MUCL39482 | rna-NM_001179385.1_MUCL39482 | cds-NP_012229.1_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:288429-289547:- | gene-YIL035C_MUCL42920 | rna-NM_001179385.1_MUCL42920 | cds-NP_012229.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:287790-288908:- | gene-YIL035C_NCIM3186 | rna-NM_001179385.1_NCIM3186 | cds-NP_012229.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005271.1:289559-290677:- | gene-YIL035C_NCYC1407 | rna-NM_001179385.1_NCYC1407 | cds-NP_012229.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:282822-283940:- | gene-YIL035C_PE2H3 | rna-NM_001179385.1_PE2H3 | cds-NP_012229.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:277528-278646:- | gene-YIL035C_PE2H4 | rna-NM_001179385.1_PE2H4 | cds-NP_012229.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:287790-288908:- | gene-YIL035C_S288C | rna-NM_001179385.1_S288C | cds-NP_012229.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000031.1:37248-38366:+ | gene-YIL035C_SA1 | rna-NM_001179385.1_SA1 | cds-NP_012229.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:284740-285858:- | gene-YIL035C_ThermosaccDry | rna-NM_001179385.1_ThermosaccDry | cds-NP_012229.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:282179-283297:- | gene-YIL035C_VR1 | rna-NM_001179385.1_VR1 | cds-NP_012229.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000019.1:258593-259711:- | gene-YIL035C_ZTW1 | rna-NM_001179385.1_ZTW1 | cds-NP_012229.1_ZTW1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:280661-281779:- | gene-YIL035C_Sparadoxus | rna-NM_001179385.1_Sparadoxus | cds-NP_012229.1_Sparadoxus | 93.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |