Gene name: CIS3
Reference locus (S288C): YJL158C
Gene biotype: protein_coding
Description: Cell wall mannoprotein CIS3; Mannose-containing glycoprotein constituent of the cell wall; member of the PIR (proteins with internal repeats) family
Top 10 interactors (score): CRH1 (0.975); CTS1 (0.943); AMA1 (0.892); SCW4 (0.888); HMX1 (0.885); SCW10 (0.858); YFL040W (0.829); YOR248W (0.767); EXG1 (0.742); MNN9 (0.705); KEX2 (0.673); TOS1 (0.672); TOS6 (0.669); PSA1 (0.658); PMT2 (0.65); VBA5 (0.646); VBA3 (0.646); PMT4 (0.646); GAS1 (0.644); YER079W (0.64)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:110572-111255:- | gene-YJL158C_AKU4011 | rna-NM_001181591.1_AKU4011 | cds-NP_012377.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000186.1:22652-23335:- | gene-YJL158C_BG1 | rna-NM_001181591.1_BG1 | cds-NP_012377.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:122412-123089:- | gene-YJL158C_Bruggeman | rna-NM_001181591.1_Bruggeman | cds-NP_012377.1_Bruggeman | 97.8 | 98.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:126196-126879:- | gene-YJL158C_CAT1 | rna-NM_001181591.1_CAT1 | cds-NP_012377.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:116207-116890:- | gene-YJL158C_CBS1585 | rna-NM_001181591.1_CBS1585 | cds-NP_012377.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:140973-141650:- | gene-YJL158C_CBS436 | rna-NM_001181591.1_CBS436 | cds-NP_012377.1_CBS436 | 97.8 | 98.6 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:112616-113299:- | gene-YJL158C_CBS6412 | rna-NM_001181591.1_CBS6412 | cds-NP_012377.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:113679-114362:- | gene-YJL158C_CBS6413 | rna-NM_001181591.1_CBS6413 | cds-NP_012377.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:104677-105354:- | gene-YJL158C_CENPK1137D | rna-NM_001181591.1_CENPK1137D | cds-NP_012377.1_CENPK1137D | 97.8 | 98.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:114731-115414:- | gene-YJL158C_EthanolRed | rna-NM_001181591.1_EthanolRed | cds-NP_012377.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:120208-120891:- | gene-YJL158C_FaliES1 | rna-NM_001181591.1_FaliES1 | cds-NP_012377.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000099.1:1387-2071:- | gene-YJL158C_JAY291 | rna-NM_001181591.1_JAY291 | cds-NP_012377.1_JAY291 | 99.5 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:124234-124911:- | gene-YJL158C_MUCL30387 | rna-NM_001181591.1_MUCL30387 | cds-NP_012377.1_MUCL30387 | 97.8 | 98.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:120712-121389:- | gene-YJL158C_MUCL30388 | rna-NM_001181591.1_MUCL30388 | cds-NP_012377.1_MUCL30388 | 97.8 | 98.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:114949-115632:- | gene-YJL158C_MUCL39482 | rna-NM_001181591.1_MUCL39482 | cds-NP_012377.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:119567-120244:- | gene-YJL158C_MUCL42920 | rna-NM_001181591.1_MUCL42920 | cds-NP_012377.1_MUCL42920 | 97.8 | 98.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:122244-122927:- | gene-YJL158C_NCIM3186 | rna-NM_001181591.1_NCIM3186 | cds-NP_012377.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:113557-114240:- | gene-YJL158C_NCYC1407 | rna-NM_001181591.1_NCYC1407 | cds-NP_012377.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:126368-127051:- | gene-YJL158C_PE2H3 | rna-NM_001181591.1_PE2H3 | cds-NP_012377.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:126007-126690:- | gene-YJL158C_PE2H4 | rna-NM_001181591.1_PE2H4 | cds-NP_012377.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:122265-122948:- | gene-YJL158C_S288C | rna-NM_001181591.1_S288C | cds-NP_012377.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000022.1:30649-31326:+ | gene-YJL158C_SA1 | rna-NM_001181591.1_SA1 | cds-NP_012377.1_SA1 | 97.8 | 98.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:113399-114082:- | gene-YJL158C_ThermosaccDry | rna-NM_001181591.1_ThermosaccDry | cds-NP_012377.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:120084-120767:- | gene-YJL158C_VR1 | rna-NM_001181591.1_VR1 | cds-NP_012377.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:100855-101538:- | gene-YJL158C_ZTW1 | rna-NM_001181591.1_ZTW1 | cds-NP_012377.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:126015-126707:- | gene-YJL158C_Sparadoxus | rna-NM_001181591.1_Sparadoxus | cds-NP_012377.1_Sparadoxus | 89.3 | 99.4 | Verified | 1 | 1 | 1 | False | True | False | False | False |