Gene name: CIN5
Reference locus (S288C): YOR028C
Gene biotype: protein_coding
Description: Basic leucine zipper (bZIP) transcription factor of the yAP-1 family; physically interacts with the Tup1-Cyc8 complex and recruits Tup1p to its targets; mediates pleiotropic drug resistance and salt tolerance; nuclearly localized under oxidative stress and sequestered in the cytoplasm by Lot6p under reducing conditions; CIN5 has a paralog, YAP6, that arose from the whole genome duplication
Top 10 interactors (score): YAP7 (0.813); YAP1 (0.813); SKN7 (0.813); SKO1 (0.789); SOK2 (0.787); NRG1 (0.779); MSN2 (0.779); MSN4 (0.758); YAP5 (0.748); GCN4 (0.746); RPN4 (0.736); FMP48 (0.73); CUP9 (0.718); XBP1 (0.717); ROX1 (0.715); STE12 (0.713); CAD1 (0.711); PHD1 (0.711); TEC1 (0.7); SWI4 (0.697)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:367745-368632:- | gene-YOR028C_AKU4011 | rna-NM_001183447.1_AKU4011 | cds-NP_014671.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000152.1:183323-184210:- | gene-YOR028C_BG1 | rna-NM_001183447.1_BG1 | cds-NP_014671.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:370488-371375:- | gene-YOR028C_Bruggeman | rna-NM_001183447.1_Bruggeman | cds-NP_014671.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:368642-369529:- | gene-YOR028C_CAT1 | rna-NM_001183447.1_CAT1 | cds-NP_014671.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:362437-363324:- | gene-YOR028C_CBS1585 | rna-NM_001183447.1_CBS1585 | cds-NP_014671.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:366792-367679:- | gene-YOR028C_CBS436 | rna-NM_001183447.1_CBS436 | cds-NP_014671.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:361790-362677:- | gene-YOR028C_CBS6412 | rna-NM_001183447.1_CBS6412 | cds-NP_014671.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:369166-370053:- | gene-YOR028C_CBS6413 | rna-NM_001183447.1_CBS6413 | cds-NP_014671.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:383417-384305:- | gene-YOR028C_CENPK1137D | rna-NM_001183447.1_CENPK1137D | cds-NP_014671.1_CENPK1137D | 99.3 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:364446-365333:- | gene-YOR028C_EthanolRed | rna-NM_001183447.1_EthanolRed | cds-NP_014671.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:367794-368681:- | gene-YOR028C_FaliES1 | rna-NM_001183447.1_FaliES1 | cds-NP_014671.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000035.1:38439-39326:- | gene-YOR028C_JAY291 | rna-NM_001183447.1_JAY291 | cds-NP_014671.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:374875-375762:- | gene-YOR028C_MUCL30387 | rna-NM_001183447.1_MUCL30387 | cds-NP_014671.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:378310-379197:- | gene-YOR028C_MUCL30388 | rna-NM_001183447.1_MUCL30388 | cds-NP_014671.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:369920-370807:- | gene-YOR028C_MUCL39482 | rna-NM_001183447.1_MUCL39482 | cds-NP_014671.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:384733-385620:- | gene-YOR028C_MUCL42920 | rna-NM_001183447.1_MUCL42920 | cds-NP_014671.1_MUCL42920 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:383422-384309:- | gene-YOR028C_NCIM3186 | rna-NM_001183447.1_NCIM3186 | cds-NP_014671.1_NCIM3186 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:376622-377509:- | gene-YOR028C_NCYC1407 | rna-NM_001183447.1_NCYC1407 | cds-NP_014671.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:375459-376346:- | gene-YOR028C_PE2H3 | rna-NM_001183447.1_PE2H3 | cds-NP_014671.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:385838-386725:- | gene-YOR028C_PE2H4 | rna-NM_001183447.1_PE2H4 | cds-NP_014671.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:383533-384420:- | gene-YOR028C_S288C | rna-NM_001183447.1_S288C | cds-NP_014671.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000001.1:351326-352213:- | gene-YOR028C_SA1 | rna-NM_001183447.1_SA1 | cds-NP_014671.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:366334-367221:- | gene-YOR028C_ThermosaccDry | rna-NM_001183447.1_ThermosaccDry | cds-NP_014671.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:367223-368110:- | gene-YOR028C_VR1 | rna-NM_001183447.1_VR1 | cds-NP_014671.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:100962-101849:- | gene-YOR028C_ZTW1 | rna-NM_001183447.1_ZTW1 | cds-NP_014671.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:373493-374380:- | gene-YOR028C_Sparadoxus | rna-NM_001183447.1_Sparadoxus | cds-NP_014671.1_Sparadoxus | 87.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |