Gene name: CIN2
Reference locus (S288C): YPL241C
Gene biotype: protein_coding
Description: Tubulin-specific chaperone C; GTPase-activating protein (GAP) for Cin4p; tubulin folding factor C involved in beta-tubulin (Tub2p) folding; mutants display increased chromosome loss and benomyl sensitivity; human homolog RP2 complements yeast null mutant
Top 10 interactors (score): CIN1 (0.969); CIN4 (0.947); RBL2 (0.925); TUB3 (0.917); PAC2 (0.852); BIK1 (0.846); GIM5 (0.833); SWC3 (0.825); YKE2 (0.818); VPS72 (0.814); GIM3 (0.811); VPS71 (0.807); MAD2 (0.804); MAD1 (0.783); CIN8 (0.782); ARP6 (0.774); MAD3 (0.763); GIM4 (0.742); MCM21 (0.711); BIM1 (0.685)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:73120-74007:- | gene-YPL241C_AKU4011 | rna-NM_001184055.1_AKU4011 | cds-NP_015083.1_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000184.1:1137-2023:+ | gene-YPL241C_BG1 | rna-NM_001184055.1_BG1 | cds-NP_015083.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:97005-97891:- | gene-YPL241C_Bruggeman | rna-NM_001184055.1_Bruggeman | cds-NP_015083.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:95119-96005:- | gene-YPL241C_CAT1 | rna-NM_001184055.1_CAT1 | cds-NP_015083.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:77433-78320:- | gene-YPL241C_CBS1585 | rna-NM_001184055.1_CBS1585 | cds-NP_015083.1_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:91855-92741:- | gene-YPL241C_CBS436 | rna-NM_001184055.1_CBS436 | cds-NP_015083.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:82597-83484:- | gene-YPL241C_CBS6412 | rna-NM_001184055.1_CBS6412 | cds-NP_015083.1_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:73583-74470:- | gene-YPL241C_CBS6413 | rna-NM_001184055.1_CBS6413 | cds-NP_015083.1_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:95307-96193:- | gene-YPL241C_CENPK1137D | rna-NM_001184055.1_CENPK1137D | cds-NP_015083.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:72520-73406:- | gene-YPL241C_EthanolRed | rna-NM_001184055.1_EthanolRed | cds-NP_015083.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:79327-80213:- | gene-YPL241C_FaliES1 | rna-NM_001184055.1_FaliES1 | cds-NP_015083.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000264.1:537-1423:+ | gene-YPL241C_JAY291 | rna-NM_001184055.1_JAY291 | cds-NP_015083.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:90163-91049:- | gene-YPL241C_MUCL30387 | rna-NM_001184055.1_MUCL30387 | cds-NP_015083.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:88606-89492:- | gene-YPL241C_MUCL30388 | rna-NM_001184055.1_MUCL30388 | cds-NP_015083.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:70563-71450:- | gene-YPL241C_MUCL39482 | rna-NM_001184055.1_MUCL39482 | cds-NP_015083.1_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:89431-90317:- | gene-YPL241C_MUCL42920 | rna-NM_001184055.1_MUCL42920 | cds-NP_015083.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:95355-96241:- | gene-YPL241C_NCIM3186 | rna-NM_001184055.1_NCIM3186 | cds-NP_015083.1_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:77010-77897:- | gene-YPL241C_NCYC1407 | rna-NM_001184055.1_NCYC1407 | cds-NP_015083.1_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:84734-85620:- | gene-YPL241C_PE2H3 | rna-NM_001184055.1_PE2H3 | cds-NP_015083.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:84377-85263:- | gene-YPL241C_PE2H4 | rna-NM_001184055.1_PE2H4 | cds-NP_015083.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:95372-96258:- | gene-YPL241C_S288C | rna-NM_001184055.1_S288C | cds-NP_015083.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000056.1:37250-38136:- | gene-YPL241C_SA1 | rna-NM_001184055.1_SA1 | cds-NP_015083.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:79328-80214:- | gene-YPL241C_ThermosaccDry | rna-NM_001184055.1_ThermosaccDry | cds-NP_015083.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:319203-320089:- | gene-YPL241C_VR1 | rna-NM_001184055.1_VR1 | cds-NP_015083.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:78872-79758:- | gene-YPL241C_ZTW1 | rna-NM_001184055.1_ZTW1 | cds-NP_015083.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:80415-81295:- | gene-YPL241C_Sparadoxus | rna-NM_001184055.1_Sparadoxus | cds-NP_015083.1_Sparadoxus | 82.3 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |