Gene name: CIK1
Reference locus (S288C): YMR198W
Gene biotype: protein_coding
Description: Spindle pole body-associated protein CIK1; Kinesin-associated protein; required for both karyogamy and mitotic spindle organization, interacts stably and specifically with Kar3p and may function to target this kinesin to a specific cellular role; locus encodes a long and short transcript with differing functions; CIK1 has a paralog, VIK1, that arose from the whole genome duplication
Top 10 interactors (score): KAR3 (0.999); BIM1 (0.934); KAR1 (0.855); CDC31 (0.855); ATG31 (0.844); BIK1 (0.834); SGO1 (0.826); CIN8 (0.809); MCM22 (0.776); KAR4 (0.772); MAD2 (0.746); YBR138C (0.714); KIP1 (0.712); GPA1 (0.7); DBP5 (0.67); PUF3 (0.669); KIP3 (0.659); JNM1 (0.658); FUS2 (0.65); DYN1 (0.619)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:699657-701441:+ | gene-YMR198W_AKU4011 | rna-NM_001182705.1_AKU4011 | cds-NP_013925.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:253140-254924:- | gene-YMR198W_BG1 | rna-NM_001182705.1_BG1 | cds-NP_013925.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:643885-645669:+ | gene-YMR198W_Bruggeman | rna-NM_001182705.1_Bruggeman | cds-NP_013925.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:647135-648919:+ | gene-YMR198W_CAT1 | rna-NM_001182705.1_CAT1 | cds-NP_013925.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:631914-633698:+ | gene-YMR198W_CBS1585 | rna-NM_001182705.1_CBS1585 | cds-NP_013925.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:636183-637967:+ | gene-YMR198W_CBS436 | rna-NM_001182705.1_CBS436 | cds-NP_013925.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:743472-745256:+ | gene-YMR198W_CBS6412 | rna-NM_001182705.1_CBS6412 | cds-NP_013925.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:631064-632848:+ | gene-YMR198W_CBS6413 | rna-NM_001182705.1_CBS6413 | cds-NP_013925.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:654434-656218:+ | gene-YMR198W_CENPK1137D | rna-NM_001182705.1_CENPK1137D | cds-NP_013925.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:692104-693888:+ | gene-YMR198W_EthanolRed | rna-NM_001182705.1_EthanolRed | cds-NP_013925.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:637760-639544:+ | gene-YMR198W_FaliES1 | rna-NM_001182705.1_FaliES1 | cds-NP_013925.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000141.1:146457-148241:- | gene-YMR198W_JAY291 | rna-NM_001182705.1_JAY291 | cds-NP_013925.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:637432-639216:+ | gene-YMR198W_MUCL30387 | rna-NM_001182705.1_MUCL30387 | cds-NP_013925.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:644207-645991:+ | gene-YMR198W_MUCL30388 | rna-NM_001182705.1_MUCL30388 | cds-NP_013925.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:632986-634770:+ | gene-YMR198W_MUCL39482 | rna-NM_001182705.1_MUCL39482 | cds-NP_013925.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:640327-642111:+ | gene-YMR198W_MUCL42920 | rna-NM_001182705.1_MUCL42920 | cds-NP_013925.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:659699-661483:+ | gene-YMR198W_NCIM3186 | rna-NM_001182705.1_NCIM3186 | cds-NP_013925.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:632637-634421:+ | gene-YMR198W_NCYC1407 | rna-NM_001182705.1_NCYC1407 | cds-NP_013925.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:642496-644280:+ | gene-YMR198W_PE2H3 | rna-NM_001182705.1_PE2H3 | cds-NP_013925.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:643515-645299:+ | gene-YMR198W_PE2H4 | rna-NM_001182705.1_PE2H4 | cds-NP_013925.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:659745-661529:+ | gene-YMR198W_S288C | rna-NM_001182705.1_S288C | cds-NP_013925.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000002.1:146583-148367:- | gene-YMR198W_SA1 | rna-NM_001182705.1_SA1 | cds-NP_013925.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:633886-635670:+ | gene-YMR198W_ThermosaccDry | rna-NM_001182705.1_ThermosaccDry | cds-NP_013925.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:647029-648813:+ | gene-YMR198W_VR1 | rna-NM_001182705.1_VR1 | cds-NP_013925.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000028.1:49665-51449:+ | gene-YMR198W_ZTW1 | rna-NM_001182705.1_ZTW1 | cds-NP_013925.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:651795-653579:+ | gene-YMR198W_Sparadoxus | rna-NM_001182705.1_Sparadoxus | cds-NP_013925.1_Sparadoxus | 88.4 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |