CHS7 (YHR142W)


Gene profile

Gene name: CHS7
Reference locus (S288C): YHR142W
Gene biotype: protein_coding

Description: Chitin synthase export chaperone; Protein of unknown function; may be involved in chitin biosynthesis by regulation of Chs3p export from the ER; relocalizes from bud neck to ER upon DNA replication stress

Top 10 interactors (score): CHS3 (0.979); CHS6 (0.96); CHS5 (0.947); SKT5 (0.92); CHS2 (0.911); CHS1 (0.852); CCW12 (0.823); SMI1 (0.788); GAS1 (0.786); BCK1 (0.774); PFA4 (0.768); HSP150 (0.753); SPA2 (0.737); MNN11 (0.732); ECM33 (0.678); FKS1 (0.673); YBL062W (0.671); BNI4 (0.671); YEA4 (0.635); MNN10 (0.629)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005302.1:370446-371396:+ gene-YHR142W_AKU4011 rna-NM_001179272.1_AKU4011 cds-NP_012011.1_AKU4011 99.8 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000141.1:146437-147387:- gene-YHR142W_BG1 rna-NM_001179272.1_BG1 cds-NP_012011.1_BG1 99.5 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005510.1:377912-378862:+ gene-YHR142W_Bruggeman rna-NM_001179272.1_Bruggeman cds-NP_012011.1_Bruggeman 99.5 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005526.1:372883-373833:+ gene-YHR142W_CAT1 rna-NM_001179272.1_CAT1 cds-NP_012011.1_CAT1 99.5 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005366.1:369468-370418:+ gene-YHR142W_CBS1585 rna-NM_001179272.1_CBS1585 cds-NP_012011.1_CBS1585 100.0 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005350.1:366824-367774:+ gene-YHR142W_CBS436 rna-NM_001179272.1_CBS436 cds-NP_012011.1_CBS436 99.5 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005334.1:370909-371859:+ gene-YHR142W_CBS6412 rna-NM_001179272.1_CBS6412 cds-NP_012011.1_CBS6412 99.8 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005318.1:370499-371449:+ gene-YHR142W_CBS6413 rna-NM_001179272.1_CBS6413 cds-NP_012011.1_CBS6413 100.0 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001529.1:376709-377659:+ gene-YHR142W_CENPK1137D rna-NM_001179272.1_CENPK1137D cds-NP_012011.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005478.1:429358-430308:+ gene-YHR142W_EthanolRed rna-NM_001179272.1_EthanolRed cds-NP_012011.1_EthanolRed 99.8 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005542.1:370847-371797:+ gene-YHR142W_FaliES1 rna-NM_001179272.1_FaliES1 cds-NP_012011.1_FaliES1 99.8 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000440.1:1284-2234:+ gene-YHR142W_JAY291 rna-NM_001179272.1_JAY291 cds-NP_012011.1_JAY291 99.5 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005414.1:377666-378616:+ gene-YHR142W_MUCL30387 rna-NM_001179272.1_MUCL30387 cds-NP_012011.1_MUCL30387 99.5 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005446.1:377676-378626:+ gene-YHR142W_MUCL30388 rna-NM_001179272.1_MUCL30388 cds-NP_012011.1_MUCL30388 99.6 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005286.1:369813-370763:+ gene-YHR142W_MUCL39482 rna-NM_001179272.1_MUCL39482 cds-NP_012011.1_MUCL39482 100.0 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005430.1:376033-376983:+ gene-YHR142W_MUCL42920 rna-NM_001179272.1_MUCL42920 cds-NP_012011.1_MUCL42920 99.4 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011817.1:383420-384370:+ gene-YHR142W_NCIM3186 rna-NM_001179272.1_NCIM3186 cds-NP_012011.1_NCIM3186 99.7 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005270.1:372021-372971:+ gene-YHR142W_NCYC1407 rna-NM_001179272.1_NCYC1407 cds-NP_012011.1_NCYC1407 100.0 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994147.1:371482-372432:+ gene-YHR142W_PE2H3 rna-NM_001179272.1_PE2H3 cds-NP_012011.1_PE2H3 99.5 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999879.1:378909-379859:+ gene-YHR142W_PE2H4 rna-NM_001179272.1_PE2H4 cds-NP_012011.1_PE2H4 99.5 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001140.6:383538-384488:+ gene-YHR142W_S288C rna-NM_001179272.1_S288C cds-NP_012011.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000103.1:4911-5861:- gene-YHR142W_SA1 rna-NM_001179272.1_SA1 cds-NP_012011.1_SA1 99.5 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005494.1:371930-372880:+ gene-YHR142W_ThermosaccDry rna-NM_001179272.1_ThermosaccDry cds-NP_012011.1_ThermosaccDry 99.8 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005462.1:380393-381343:+ gene-YHR142W_VR1 rna-NM_001179272.1_VR1 cds-NP_012011.1_VR1 99.5 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000017.1:362923-363873:+ gene-YHR142W_ZTW1 rna-NM_001179272.1_ZTW1 cds-NP_012011.1_ZTW1 100.0 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047494.1:369350-370300:+ gene-YHR142W_Sparadoxus rna-NM_001179272.1_Sparadoxus cds-NP_012011.1_Sparadoxus 90.4 100.0 Verified 1 1 1 False True False False False

Additional files