Gene name: CHS6
Reference locus (S288C): YJL099W
Gene biotype: protein_coding
Description: Chitin biosynthesis protein CHS6; Member of the ChAPs (Chs5p-Arf1p-binding proteins) family; part of the exomer complex that mediates export of specific cargo proteins, including Chs3p, from the Golgi to the plasma membrane; primary component of the Chs5/6 complex that binds directly to membranes; CHS6 has a paralog, BCH2, that arose from the whole genome duplication
Top 10 interactors (score): BCH2 (0.999); CHS5 (0.999); CHS3 (0.998); BCH1 (0.992); BUD7 (0.985); CHS7 (0.96); ARF1 (0.927); SKT5 (0.877); CHS1 (0.814); CHS2 (0.813); ENT5 (0.746); IRC6 (0.712); GAS1 (0.7); APM2 (0.692); CLA4 (0.683); BNI4 (0.671); FUS1 (0.667); SMI1 (0.664); APL2 (0.663); FKS1 (0.627)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:222155-224395:+ | gene-YJL099W_AKU4011 | rna-NM_001181532.1_AKU4011 | cds-NP_012436.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:390059-392299:- | gene-YJL099W_BG1 | rna-NM_001181532.1_BG1 | cds-NP_012436.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:233580-235820:+ | gene-YJL099W_Bruggeman | rna-NM_001181532.1_Bruggeman | cds-NP_012436.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:238494-240734:+ | gene-YJL099W_CAT1 | rna-NM_001181532.1_CAT1 | cds-NP_012436.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:233816-236056:+ | gene-YJL099W_CBS1585 | rna-NM_001181532.1_CBS1585 | cds-NP_012436.1_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:251903-254143:+ | gene-YJL099W_CBS436 | rna-NM_001181532.1_CBS436 | cds-NP_012436.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:222913-225153:+ | gene-YJL099W_CBS6412 | rna-NM_001181532.1_CBS6412 | cds-NP_012436.1_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:224268-226508:+ | gene-YJL099W_CBS6413 | rna-NM_001181532.1_CBS6413 | cds-NP_012436.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:221868-224108:+ | gene-YJL099W_CENPK1137D | rna-NM_001181532.1_CENPK1137D | cds-NP_012436.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:226002-228242:+ | gene-YJL099W_EthanolRed | rna-NM_001181532.1_EthanolRed | cds-NP_012436.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:237579-239819:+ | gene-YJL099W_FaliES1 | rna-NM_001181532.1_FaliES1 | cds-NP_012436.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000138.1:35196-37436:+ | gene-YJL099W_JAY291 | rna-NM_001181532.1_JAY291 | cds-NP_012436.1_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:235847-238087:+ | gene-YJL099W_MUCL30387 | rna-NM_001181532.1_MUCL30387 | cds-NP_012436.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:231925-234165:+ | gene-YJL099W_MUCL30388 | rna-NM_001181532.1_MUCL30388 | cds-NP_012436.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:226573-228813:+ | gene-YJL099W_MUCL39482 | rna-NM_001181532.1_MUCL39482 | cds-NP_012436.1_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:232754-234994:+ | gene-YJL099W_MUCL42920 | rna-NM_001181532.1_MUCL42920 | cds-NP_012436.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:239393-241633:+ | gene-YJL099W_NCIM3186 | rna-NM_001181532.1_NCIM3186 | cds-NP_012436.1_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:225262-227502:+ | gene-YJL099W_NCYC1407 | rna-NM_001181532.1_NCYC1407 | cds-NP_012436.1_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:237621-239861:+ | gene-YJL099W_PE2H3 | rna-NM_001181532.1_PE2H3 | cds-NP_012436.1_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:237265-239505:+ | gene-YJL099W_PE2H4 | rna-NM_001181532.1_PE2H4 | cds-NP_012436.1_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:239414-241654:+ | gene-YJL099W_S288C | rna-NM_001181532.1_S288C | cds-NP_012436.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000003.1:35137-37377:+ | gene-YJL099W_SA1 | rna-NM_001181532.1_SA1 | cds-NP_012436.1_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:230988-233228:+ | gene-YJL099W_ThermosaccDry | rna-NM_001181532.1_ThermosaccDry | cds-NP_012436.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:231400-233640:+ | gene-YJL099W_VR1 | rna-NM_001181532.1_VR1 | cds-NP_012436.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:212349-214589:+ | gene-YJL099W_ZTW1 | rna-NM_001181532.1_ZTW1 | cds-NP_012436.1_ZTW1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:236403-238643:+ | gene-YJL099W_Sparadoxus | rna-NM_001181532.1_Sparadoxus | cds-NP_012436.1_Sparadoxus | 89.3 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |