Gene name: CHS2
Reference locus (S288C): YBR038W
Gene biotype: protein_coding
Description: Chitin synthase II; catalyzes transfer of N-acetylglucosamine (GlcNAc) to chitin upon activation of zymogenic form; required for chitin synthesis in the primary septum during cytokinesis; localization regulated by Cdk1p during mitosis; phosphorylation by Dbf2p kinase regulates its dynamics and chitin synthesis during cytokinesis
Top 10 interactors (score): HOF1 (0.994); CYK3 (0.983); INN1 (0.976); MYO1 (0.967); QRI1 (0.956); CHS3 (0.937); IQG1 (0.914); CHS7 (0.911); DBF2 (0.885); SWI5 (0.867); CHS1 (0.854); SKT5 (0.843); MOB1 (0.835); CTS1 (0.83); CHS6 (0.813); CDC28 (0.792); MLC1 (0.789); FKS1 (0.784); ACT1 (0.76); RHO1 (0.737)
Homologues (species, bitscore): HAS3 (Homo sapiens, 51.2); chs1 (Danio rerio, 92.4); kkv (Drosophila melanogaster, 81.6); chs-2 (Caenorhabditis elegans, 81.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:294333-297224:+ | gene-YBR038W_AKU4011 | rna-NM_001178386.1_AKU4011 | cds-NP_009594.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:284491-287382:+ | gene-YBR038W_BG1 | rna-NM_001178386.1_BG1 | cds-NP_009594.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:295061-297952:+ | gene-YBR038W_Bruggeman | rna-NM_001178386.1_Bruggeman | cds-NP_009594.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:298749-301640:+ | gene-YBR038W_CAT1 | rna-NM_001178386.1_CAT1 | cds-NP_009594.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:286630-289521:+ | gene-YBR038W_CBS1585 | rna-NM_001178386.1_CBS1585 | cds-NP_009594.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:294633-297524:+ | gene-YBR038W_CBS436 | rna-NM_001178386.1_CBS436 | cds-NP_009594.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:384513-387404:+ | gene-YBR038W_CBS6412 | rna-NM_001178386.1_CBS6412 | cds-NP_009594.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:291747-294638:+ | gene-YBR038W_CBS6413 | rna-NM_001178386.1_CBS6413 | cds-NP_009594.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:305664-308555:+ | gene-YBR038W_CENPK1137D | rna-NM_001178386.1_CENPK1137D | cds-NP_009594.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:421110-424001:+ | gene-YBR038W_EthanolRed | rna-NM_001178386.1_EthanolRed | cds-NP_009594.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:309960-312851:+ | gene-YBR038W_FaliES1 | rna-NM_001178386.1_FaliES1 | cds-NP_009594.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000441.1:18873-21764:- | gene-YBR038W_JAY291 | rna-NM_001178386.1_JAY291 | cds-NP_009594.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:296682-299573:+ | gene-YBR038W_MUCL30387 | rna-NM_001178386.1_MUCL30387 | cds-NP_009594.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:296467-299358:+ | gene-YBR038W_MUCL30388 | rna-NM_001178386.1_MUCL30388 | cds-NP_009594.1_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:286618-289509:+ | gene-YBR038W_MUCL39482 | rna-NM_001178386.1_MUCL39482 | cds-NP_009594.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:293813-296704:+ | gene-YBR038W_MUCL42920 | rna-NM_001178386.1_MUCL42920 | cds-NP_009594.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:311695-314586:+ | gene-YBR038W_NCIM3186 | rna-NM_001178386.1_NCIM3186 | cds-NP_009594.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:287530-290421:+ | gene-YBR038W_NCYC1407 | rna-NM_001178386.1_NCYC1407 | cds-NP_009594.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:299698-302589:+ | gene-YBR038W_PE2H3 | rna-NM_001178386.1_PE2H3 | cds-NP_009594.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:297374-300265:+ | gene-YBR038W_PE2H4 | rna-NM_001178386.1_PE2H4 | cds-NP_009594.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:311898-314789:+ | gene-YBR038W_S288C | rna-NM_001178386.1_S288C | cds-NP_009594.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000017.1:162753-165644:- | gene-YBR038W_SA1 | rna-NM_001178386.1_SA1 | cds-NP_009594.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:309401-312292:+ | gene-YBR038W_ThermosaccDry | rna-NM_001178386.1_ThermosaccDry | cds-NP_009594.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:291051-293942:+ | gene-YBR038W_VR1 | rna-NM_001178386.1_VR1 | cds-NP_009594.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:285124-288015:+ | gene-YBR038W_ZTW1 | rna-NM_001178386.1_ZTW1 | cds-NP_009594.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:321363-324254:+ | gene-YBR038W_Sparadoxus | rna-NM_001178386.1_Sparadoxus | cds-NP_009594.1_Sparadoxus | 91.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |