Gene name: CHO2
Reference locus (S288C): YGR157W
Gene biotype: protein_coding
Description: Phosphatidylethanolamine n-methyltransferase; Phosphatidylethanolamine methyltransferase (PEMT); catalyzes the first step in the conversion of phosphatidylethanolamine to phosphatidylcholine during the methylation pathway of phosphatidylcholine biosynthesis
Top 10 interactors (score): OPI3 (0.999); PSD1 (0.994); CHO1 (0.994); PSD2 (0.987); ALE1 (0.984); EPT1 (0.975); SPO14 (0.952); TGL4 (0.936); TGL5 (0.932); CDS1 (0.905); PGS1 (0.896); OPI1 (0.888); PCT1 (0.875); INO2 (0.861); CKI1 (0.859); INO4 (0.818); SCS2 (0.817); INO1 (0.816); SAH1 (0.811); EMC6 (0.802)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:782059-784668:+ | gene-YGR157W_AKU4011 | rna-NM_001181286.1_AKU4011 | cds-NP_011673.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000021.1:60205-62814:+ | gene-YGR157W_BG1 | rna-NM_001181286.1_BG1 | cds-NP_011673.1_BG1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:787759-790368:+ | gene-YGR157W_Bruggeman | rna-NM_001181286.1_Bruggeman | cds-NP_011673.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:783827-786436:+ | gene-YGR157W_CAT1 | rna-NM_001181286.1_CAT1 | cds-NP_011673.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:782794-785403:+ | gene-YGR157W_CBS1585 | rna-NM_001181286.1_CBS1585 | cds-NP_011673.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:786680-789289:+ | gene-YGR157W_CBS436 | rna-NM_001181286.1_CBS436 | cds-NP_011673.1_CBS436 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:773813-776422:+ | gene-YGR157W_CBS6412 | rna-NM_001181286.1_CBS6412 | cds-NP_011673.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:779645-782254:+ | gene-YGR157W_CBS6413 | rna-NM_001181286.1_CBS6413 | cds-NP_011673.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:802173-804782:+ | gene-YGR157W_CENPK1137D | rna-NM_001181286.1_CENPK1137D | cds-NP_011673.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:768359-770968:+ | gene-YGR157W_EthanolRed | rna-NM_001181286.1_EthanolRed | cds-NP_011673.1_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:772563-775172:+ | gene-YGR157W_FaliES1 | rna-NM_001181286.1_FaliES1 | cds-NP_011673.1_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000112.1:14970-17579:+ | gene-YGR157W_JAY291 | rna-NM_001181286.1_JAY291 | cds-NP_011673.1_JAY291 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:785498-788107:+ | gene-YGR157W_MUCL30387 | rna-NM_001181286.1_MUCL30387 | cds-NP_011673.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:785196-787805:+ | gene-YGR157W_MUCL30388 | rna-NM_001181286.1_MUCL30388 | cds-NP_011673.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:778360-780969:+ | gene-YGR157W_MUCL39482 | rna-NM_001181286.1_MUCL39482 | cds-NP_011673.1_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:793308-795917:+ | gene-YGR157W_MUCL42920 | rna-NM_001181286.1_MUCL42920 | cds-NP_011673.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:802440-805049:+ | gene-YGR157W_NCIM3186 | rna-NM_001181286.1_NCIM3186 | cds-NP_011673.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:773463-776072:+ | gene-YGR157W_NCYC1407 | rna-NM_001181286.1_NCYC1407 | cds-NP_011673.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:792673-795282:+ | gene-YGR157W_PE2H3 | rna-NM_001181286.1_PE2H3 | cds-NP_011673.1_PE2H3 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:797783-800392:+ | gene-YGR157W_PE2H4 | rna-NM_001181286.1_PE2H4 | cds-NP_011673.1_PE2H4 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:802440-805049:+ | gene-YGR157W_S288C | rna-NM_001181286.1_S288C | cds-NP_011673.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000035.1:37591-40200:+ | gene-YGR157W_SA1 | rna-NM_001181286.1_SA1 | cds-NP_011673.1_SA1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:793070-795679:+ | gene-YGR157W_ThermosaccDry | rna-NM_001181286.1_ThermosaccDry | cds-NP_011673.1_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:897573-900182:+ | gene-YGR157W_VR1 | rna-NM_001181286.1_VR1 | cds-NP_011673.1_VR1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000016.1:95011-97620:+ | gene-YGR157W_ZTW1 | rna-NM_001181286.1_ZTW1 | cds-NP_011673.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:782602-785211:+ | gene-YGR157W_Sparadoxus | rna-NM_001181286.1_Sparadoxus | cds-NP_011673.1_Sparadoxus | 90.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |